Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
UFD1Q92890 RNY1P16-201ENST00000363063 111 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 RNU6-457P-201ENST00000363999 107 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 RNU6-879P-201ENST00000364328 108 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 Y_RNA.267-201ENST00000364679 109 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 Y_RNA.557-201ENST00000384680 107 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 MIR222-201ENST00000384992 110 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 SNORD41-201ENST00000386967 70 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 MIR548F5-201ENST00000408421 86 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 MIR1277-201ENST00000408536 78 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 RNU6-1050P-201ENST00000410388 107 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 AL353997.1-201ENST00000432936 108 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 RPS3AP52-201ENST00000435639 297 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 UBE2V1P7-201ENST00000446395 340 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 AC105758.1-201ENST00000506038 399 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 SNORA31.2-201ENST00000516019 134 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 RNU7-28P-201ENST00000516759 62 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.92□□□□□ -2.26
UFD1Q92890 AC090049.2-201ENST00000550377 109 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 AC018448.1-201ENST00000552843 316 ntBASIC0.92□□□□□ -2.26
UFD1Q92890 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.92□□□□□ -2.26
UFD1Q92890 MIR410-201ENST00000362222 80 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 RNU6-376P-201ENST00000384731 106 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 MTND3P8-201ENST00000412909 339 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.91□□□□□ -2.26
UFD1Q92890 AL591806.2-201ENST00000433122 173 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 PCNPP5-201ENST00000452246 481 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 U8.22-201ENST00000459141 133 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 AC048334.1-201ENST00000477975 159 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 AC093852.1-201ENST00000503587 266 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.91□□□□□ -2.26
UFD1Q92890 SNORA31.4-201ENST00000516049 129 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 Y_RNA.708-201ENST00000516950 96 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.91□□□□□ -2.26
UFD1Q92890 AP002004.2-201ENST00000531656 154 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.91□□□□□ -2.26
UFD1Q92890 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 AC002553.4-201ENST00000616896 331 ntBASIC0.91□□□□□ -2.26
UFD1Q92890 SNORA1B-201ENST00000362535 133 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 RNU4-79P-201ENST00000362764 141 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 RNU1-17P-201ENST00000363022 152 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 Y_RNA.498-201ENST00000384460 102 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 RNU6-601P-201ENST00000384540 107 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AL451046.2-201ENST00000403074 277 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 RNU6-1054P-201ENST00000411293 104 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AL137792.2-201ENST00000443484 235 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 HSPE1P13-201ENST00000451143 297 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AC011352.1-201ENST00000512300 793 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.9□□□□□ -2.27
UFD1Q92890 RNU6-1278P-201ENST00000516130 107 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 RNU6-917P-201ENST00000516294 104 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 RN7SKP49-201ENST00000516675 260 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AC022868.1-201ENST00000517767 391 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AF235103.2-201ENST00000525753 346 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AP002001.1-203ENST00000534002 267 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AC080078.2-201ENST00000603766 501 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 AC009229.3-201ENST00000608056 282 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 U6.115-201ENST00000636045 103 ntBASIC0.9□□□□□ -2.27
UFD1Q92890 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UFD1Q92890 AC005592.1-201ENST00000566527 1640 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 Y_RNA.6-201ENST00000362350 114 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 SNORA2.2-201ENST00000365473 135 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.89□□□□□ -2.27
UFD1Q92890 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UFD1Q92890 RNU6-910P-201ENST00000390844 107 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.89□□□□□ -2.27
UFD1Q92890 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.89□□□□□ -2.27
UFD1Q92890 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.89□□□□□ -2.27
UFD1Q92890 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.89□□□□□ -2.27
UFD1Q92890 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
UFD1Q92890 AC245047.7-201ENST00000440265 293 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.89□□□□□ -2.27
UFD1Q92890 AC107399.1-201ENST00000451226 265 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 AC093850.1-201ENST00000454121 251 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 RNU6-625P-201ENST00000459412 107 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 RPL7P42-201ENST00000481005 679 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 AC108210.2-201ENST00000503681 201 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 RNU6-322P-201ENST00000516010 103 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 RNU6-1291P-201ENST00000516591 104 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 BNIP3P10-201ENST00000605360 577 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 AL512598.1-201ENST00000610158 273 ntBASIC0.89□□□□□ -2.27
UFD1Q92890 RNU6-454P-201ENST00000364292 107 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 Y_RNA.339-201ENST00000365325 102 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 RNU6-117P-201ENST00000365415 107 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 Y_RNA.358-201ENST00000365491 99 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 RNU6-318P-201ENST00000384283 103 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 RNA5SP482-201ENST00000391269 118 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 MIR873-201ENST00000401120 77 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 AC092423.1-201ENST00000430165 186 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 MTND1P34-201ENST00000438556 671 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 MTND3P10-201ENST00000450967 341 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.88□□□□□ -2.27
UFD1Q92890 AC022493.2-201ENST00000506122 481 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 SNORA40.9-201ENST00000515895 93 ntBASIC0.88□□□□□ -2.27
UFD1Q92890 RNU7-12P-201ENST00000516030 62 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 1311.6 ms