Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL23AP7-203ENST00000449021 469 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 SNORD65B-201ENST00000459126 73 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 COX6CP14-201ENST00000469580 174 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 AC010598.1-201ENST00000510378 103 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 SNORD116-28-201ENST00000516123 91 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 AC009127.3-201ENST00000570531 403 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.03
ATG4AQ8WYN0 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 SNORA27.1-201ENST00000362604 124 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 RNU6-271P-201ENST00000363858 105 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.297-201ENST00000364950 91 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 RNY4P28-201ENST00000365281 93 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AL121890.1-201ENST00000435457 205 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AL135790.2-201ENST00000437701 267 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 RNU6-856P-201ENST00000516959 98 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 MIR5194-201ENST00000582634 120 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 MIR4672-201ENST00000583126 81 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AC011921.3-201ENST00000605540 361 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 AC073349.3-201ENST00000617616 186 ntBASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4AQ8WYN0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.83-201ENST00000363005 113 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.199-201ENST00000364014 102 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 RNU6-855P-201ENST00000410395 104 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 SNORA4.4-201ENST00000515921 135 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AL078604.3-201ENST00000615580 211 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AC006435.5-201ENST00000624486 112 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 snoU18.1-201ENST00000629629 71 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ATG4AQ8WYN0 AL136360.1-201ENST00000503377 1900 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 MIR411-201ENST00000362239 96 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 RNU6-211P-201ENST00000384047 107 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 BTF3P11-201ENST00000426582 477 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 MTND5P15-201ENST00000434246 349 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 RNU7-26P-201ENST00000458980 63 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 RPS26P55-201ENST00000471178 356 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 AC136628.3-201ENST00000521868 290 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 AC087441.2-201ENST00000529141 262 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 AL008718.3-201ENST00000610217 321 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.37□□□□□ -2.03
ATG4AQ8WYN0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 RNU6-801P-201ENST00000364087 105 ntBASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 RNU6-763P-201ENST00000390865 106 ntBASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 HSPE1P13-201ENST00000451143 297 ntBASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 SNORA81.3-201ENST00000517283 198 ntBASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 AC027419.1-201ENST00000522976 328 ntBASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 MIR3162-201ENST00000581818 82 ntBASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4AQ8WYN0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 RNU6-407P-201ENST00000365280 104 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 SNORA72.4-201ENST00000384174 132 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 EDDM3CP-201ENST00000415977 425 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 AL138752.1-201ENST00000452964 351 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 AP005660.1-201ENST00000522972 293 ntBASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ATG4AQ8WYN0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms