Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC104383.1-201ENST00000530297 370 ntBASIC0.18□□□□□ -2.38
ZNF439Q8NDP4 AL133215.3-201ENST00000609801 448 ntBASIC0.18□□□□□ -2.38
ZNF439Q8NDP4 AC007742.2-201ENST00000618226 398 ntBASIC0.18□□□□□ -2.38
ZNF439Q8NDP4 AC072046.2-201ENST00000618366 268 ntBASIC0.18□□□□□ -2.38
ZNF439Q8NDP4 AC006504.8-201ENST00000621046 635 ntBASIC0.18□□□□□ -2.38
ZNF439Q8NDP4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
ZNF439Q8NDP4 SNORD113-7-201ENST00000363762 77 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 RNU5F-3P-201ENST00000363767 117 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 Y_RNA.319-201ENST00000365138 92 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 Y_RNA.336-201ENST00000365307 109 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 SNORA20B-201ENST00000384220 132 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 RNU6-1297P-201ENST00000384415 104 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 MIR891A-201ENST00000401237 79 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 RNA5SP222-201ENST00000411039 105 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 RPL30P16-201ENST00000419341 429 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 RNU7-41P-201ENST00000515917 61 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 RN7SKP164-201ENST00000516138 266 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 MIR4528-201ENST00000577763 90 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 AC040904.1-201ENST00000590850 223 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 AC007684.1-201ENST00000609671 477 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 AC022960.3-201ENST00000619794 441 ntBASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.17□□□□□ -2.38
ZNF439Q8NDP4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 Y_RNA.151-201ENST00000363566 112 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNY1-201ENST00000364228 113 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNU4-9P-201ENST00000364951 139 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNU4-66P-201ENST00000365199 138 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 SNORA36.2-201ENST00000384004 127 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNU6-214P-201ENST00000384130 107 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNU6-1103P-201ENST00000384150 107 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNU6-933P-201ENST00000384424 107 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 RNU6-159P-201ENST00000391080 106 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 SNORD111-201ENST00000408139 94 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 ZNF885P-201ENST00000420174 1098 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AL365203.2-201ENST00000423444 196 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 PIGPP3-201ENST00000425307 415 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 MTCO1P20-201ENST00000425366 358 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 SNORA19.2-201ENST00000516013 114 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AL358944.1-201ENST00000528537 144 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AC100830.2-201ENST00000581636 240 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 Z94722.1-201ENST00000604328 474 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 AC092807.2-201ENST00000609367 243 ntBASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
ZNF439Q8NDP4 Y_RNA.184-201ENST00000363884 108 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU6-280P-201ENST00000364145 104 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU6-654P-201ENST00000364373 107 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU5A-6P-201ENST00000384136 116 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU6-342P-201ENST00000384521 104 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 MIR216A-201ENST00000385063 110 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 MIR1302-7-201ENST00000408841 72 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNA5SP511-201ENST00000410487 115 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNU6-261P-201ENST00000459506 102 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AC018710.1-201ENST00000506509 158 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AC091885.1-201ENST00000506658 268 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 RNA5SP401-201ENST00000515920 127 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 SNORA40.12-201ENST00000516329 111 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AF235103.2-201ENST00000525753 346 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AC023442.1-201ENST00000531247 422 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 MIR3684-201ENST00000579779 74 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AC109347.2-201ENST00000610220 349 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AL158063.1-201ENST00000615349 536 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 AC027279.3-201ENST00000625055 122 ntBASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
ZNF439Q8NDP4 Y_RNA.179-201ENST00000363844 90 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNU6-117P-201ENST00000365415 107 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNU6-136P-201ENST00000384663 107 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MIR452-201ENST00000385020 85 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MIR153-2-201ENST00000385225 87 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MIR140-201ENST00000385282 100 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 SNORD105-201ENST00000386910 85 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MIR1298-201ENST00000408783 112 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 AC018865.2-201ENST00000423631 129 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MTND1P27-201ENST00000451117 902 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MTND3P16-201ENST00000452205 344 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MTND1P11-201ENST00000456661 876 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNU6-1208P-201ENST00000459588 107 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 AC083904.1-201ENST00000487828 231 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 Y_RNA.654-201ENST00000497848 106 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 MTCO2P30-201ENST00000503662 364 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 AC114811.1-201ENST00000507207 168 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 AC093303.1-201ENST00000514549 295 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNA5SP20-201ENST00000515976 84 ntBASIC0.14□□□□□ -2.39
ZNF439Q8NDP4 RNU11-2P-201ENST00000516898 142 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms