Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AL353149.1-201ENST00000610667 244 ntBASIC1.84□□□□□ -2.11
SLC38A9Q8NBW4 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
SLC38A9Q8NBW4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 MIR583-201ENST00000384846 75 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 MIR1252-201ENST00000408861 65 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 CST2P1-201ENST00000425770 87 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC099677.2-201ENST00000436385 175 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC025033.1-201ENST00000463883 194 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-397P-201ENST00000516226 104 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC055872.1-201ENST00000570978 278 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC006504.6-201ENST00000590142 199 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC008749.1-201ENST00000597650 306 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC069114.2-201ENST00000604699 304 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.812-201ENST00000610788 101 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.784-201ENST00000613803 101 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.787-201ENST00000616522 101 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.780-201ENST00000617336 101 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AL353997.5-201ENST00000618886 171 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.801-201ENST00000619005 101 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 SNORA20B-201ENST00000384220 132 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AL117342.1-201ENST00000404861 406 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AL021397.1-201ENST00000451806 248 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 RPS27P22-201ENST00000478056 241 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-155P-201ENST00000516347 100 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 MIR4448-201ENST00000584360 86 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 AL021879.1-201ENST00000611756 288 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 U6.115-201ENST00000636045 103 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 CENPCP1-201ENST00000533085 2578 ntBASIC1.82□□□□□ -2.12
SLC38A9Q8NBW4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.152-201ENST00000363578 100 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-324P-201ENST00000363957 106 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.326-201ENST00000365176 113 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-407P-201ENST00000365280 104 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-937P-201ENST00000384325 106 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 MIR515-2-201ENST00000384883 83 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 MIR515-1-201ENST00000384884 83 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNA5SP467-201ENST00000391274 118 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AL390729.2-201ENST00000416137 156 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RPL23AP7-203ENST00000449021 469 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-764P-201ENST00000516396 105 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU1-142P-201ENST00000516682 145 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 RNU7-110P-201ENST00000516891 62 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AC023157.2-201ENST00000540596 141 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 MIR4719-201ENST00000585233 84 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AC011373.1-201ENST00000607270 237 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 PART1_1.1-201ENST00000611761 217 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AL359075.3-201ENST00000613288 217 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AC006435.5-201ENST00000624486 112 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 AP000553.5-201ENST00000641933 54 ntBASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SLC38A9Q8NBW4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-271P-201ENST00000363858 105 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 AL355796.1-201ENST00000406706 323 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 RNU2-54P-201ENST00000410299 190 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 RPL23AP36-201ENST00000413895 458 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 AL603825.1-201ENST00000438481 80 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 RPL23AP6-201ENST00000446637 472 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 SUMO1P2-201ENST00000452524 304 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 SNORA40.15-201ENST00000516884 107 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 RNU2-12P-201ENST00000517216 168 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 AC113195.1-201ENST00000579952 141 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 MIR4438-201ENST00000585271 93 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
SLC38A9Q8NBW4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
SLC38A9Q8NBW4 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
SLC38A9Q8NBW4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.79□□□□□ -2.12
SLC38A9Q8NBW4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms