Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Y_RNA.453-201ENST00000384223 109 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.490-201ENST00000384413 102 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU6-910P-201ENST00000390844 107 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 MIR190B-201ENST00000401119 79 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU7-87P-201ENST00000459343 62 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 OR9P1P-201ENST00000496431 281 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 AC105758.1-201ENST00000506038 399 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 AC026782.1-201ENST00000512952 449 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 SNORD116-28-201ENST00000516123 91 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU6-947P-201ENST00000516264 106 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RN7SKP49-201ENST00000516675 260 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 MIR5701-3-201ENST00000578890 82 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 MIR5701-1-201ENST00000585138 82 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 MIR5701-2-201ENST00000615634 82 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU6-199P-201ENST00000362954 107 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 RNU6-424P-201ENST00000384367 105 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 MTCO3P19-201ENST00000415864 321 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC018865.2-201ENST00000423631 129 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AL353997.1-201ENST00000432936 108 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 UQCRBP2-201ENST00000447827 297 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 RNA5SP20-201ENST00000515976 84 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 RNU6-1291P-201ENST00000516591 104 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC090617.3-201ENST00000573670 475 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC091178.2-201ENST00000584401 117 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AL162424.1-201ENST00000602325 221 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC018462.2-201ENST00000605375 395 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC093913.1-201ENST00000614178 329 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC006435.5-201ENST00000624486 112 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 AC068137.4-201ENST00000638485 296 ntBASIC0.95□□□□□ -2.26
CCDC50Q8IVM0 SNORA1B-201ENST00000362535 133 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 RNU6-1145P-201ENST00000384246 107 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.557-201ENST00000384680 107 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 MIR653-201ENST00000385279 96 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 RNU6-329P-201ENST00000459618 107 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 RNU6-718P-201ENST00000516166 105 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.670-201ENST00000516255 105 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 AL359821.1-201ENST00000605519 182 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 GHRLOS.1-201ENST00000610995 70 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 AC093783.1-201ENST00000612976 329 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 AC073544.1-201ENST00000600110 1595 ntBASIC0.94□□□□□ -2.26
CCDC50Q8IVM0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.2-201ENST00000362330 96 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 SNORA27.1-201ENST00000362604 124 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 RNU6-879P-201ENST00000364328 108 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 RNU6-136P-201ENST00000384663 107 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.594-201ENST00000410373 140 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 RNA5SP118-201ENST00000410385 109 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 HMGN1P7-201ENST00000491722 313 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 AC005840.1-201ENST00000498412 377 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 RNU2-56P-201ENST00000516826 190 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 RNU6-1116P-201ENST00000517269 99 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 AL121579.1-201ENST00000555129 305 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 SNORA28-201ENST00000606769 126 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 AC090517.2-201ENST00000614966 680 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC50Q8IVM0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RNU4-79P-201ENST00000362764 141 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.86-201ENST00000363020 111 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RNU6-623P-201ENST00000363143 105 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.124-201ENST00000363339 93 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RNU6-454P-201ENST00000364292 107 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.364-201ENST00000365532 101 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RNU6-1264P-201ENST00000383891 107 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RNU6-376P-201ENST00000384731 106 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.573-201ENST00000384763 105 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 MIR548F5-201ENST00000408421 86 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 AL139396.1-201ENST00000421137 167 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 AC104332.1-201ENST00000440471 797 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 AC108729.3-201ENST00000513484 108 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RNU7-12P-201ENST00000516030 62 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 AC090049.2-201ENST00000550377 109 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 RPL21P9-201ENST00000556149 474 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 AL117336.2-201ENST00000602435 335 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 U6.115-201ENST00000636045 103 ntBASIC0.92□□□□□ -2.26
CCDC50Q8IVM0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
CCDC50Q8IVM0 MIRLET7C-201ENST00000362160 84 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms