Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 AC141557.1-201ENST00000540982 400 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 AC011604.1-201ENST00000545978 196 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 MIR4662B-201ENST00000579498 81 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 AC134878.1-201ENST00000619901 243 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 RNA5SP189-201ENST00000364920 115 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 SNORA9-201ENST00000384215 133 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 SNORD61-201ENST00000384252 73 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 MIR23A-201ENST00000385245 73 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 RPL36AP48-201ENST00000485521 314 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 RNU6-240P-201ENST00000516098 97 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 MIR5009-201ENST00000578736 100 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 AC090517.3-201ENST00000625170 141 ntBASIC3.05□□□□□ -1.92
ATG4DQ86TL0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.05□□□□□ -1.92
ATG4DQ86TL0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RNU6-414P-201ENST00000363705 104 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 Y_RNA.219-201ENST00000364232 113 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RNU6-1134P-201ENST00000365156 101 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RNU6-418P-201ENST00000384035 107 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 AL031121.1-201ENST00000406553 254 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RNA5SP225-201ENST00000410874 135 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RPL30P4-201ENST00000429309 333 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RPL23AP83-201ENST00000434984 473 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 AC018634.1-201ENST00000437554 401 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 AC093663.1-201ENST00000497190 394 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RNU6-113P-201ENST00000516653 101 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 AC068339.1-201ENST00000526965 141 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 AC013412.1-201ENST00000610687 192 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 JPX_2.1-201ENST00000614161 69 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 U6.73-201ENST00000619194 103 ntBASIC3.04□□□□□ -1.92
ATG4DQ86TL0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4DQ86TL0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 RNA5SP295-201ENST00000362655 121 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 Y_RNA.198-201ENST00000364013 98 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 MIR491-201ENST00000384877 84 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 AC016909.1-201ENST00000415916 166 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 AC063976.3-201ENST00000426849 329 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 PGBD4P5-201ENST00000445958 426 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 HMGN1P18-201ENST00000457642 277 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 MRPS17P9-201ENST00000511924 393 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 RNU6-830P-201ENST00000516353 107 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 RNU6-126P-201ENST00000516685 103 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 SCARNA15-202ENST00000516881 127 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 AL590808.1-201ENST00000618696 141 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 Y_RNA.818-201ENST00000618813 71 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 MAPK10-362ENST00000641864 4484 ntBASIC3.03□□□□□ -1.92
ATG4DQ86TL0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.03□□□□□ -1.92
ATG4DQ86TL0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.93
ATG4DQ86TL0 AC002546.1-201ENST00000588041 2504 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AL049781.1-201ENST00000623195 3585 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 RNU1-22P-201ENST00000363334 158 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 RNY4P6-201ENST00000363667 96 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.342-201ENST00000365352 113 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 MT-TI-201ENST00000387365 69 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 RNU6-750P-201ENST00000390946 107 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AC107297.1-201ENST00000459991 176 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 SNORA70.24-201ENST00000517233 118 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AC026421.1-201ENST00000519101 163 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 IGKV3-31-201ENST00000523109 329 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AC079598.5-201ENST00000547460 117 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AC008739.2-201ENST00000597006 317 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 AC025521.1-201ENST00000621624 286 ntBASIC3.02□□□□□ -1.93
ATG4DQ86TL0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
ATG4DQ86TL0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms