Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC007179.3-201ENST00000604976 235 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 AL021707.8-201ENST00000609428 183 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 Z82209.1-201ENST00000422141 2135 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 Y_RNA.294-201ENST00000364916 102 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 RNU6-597P-201ENST00000365620 102 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 RNU6-546P-201ENST00000383991 107 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 Y_RNA.432-201ENST00000384087 111 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 AC010154.1-201ENST00000425857 269 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 RNU6-1299P-201ENST00000516316 100 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 RNU6-197P-201ENST00000516680 100 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 PRELID2P1-201ENST00000552837 301 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 AC105245.1-201ENST00000581934 244 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 MIR3117-201ENST00000584034 78 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 AC090115.4-201ENST00000609970 188 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 AC093010.3-201ENST00000570269 15214 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
RNF111Q6ZNA4 MAPK10-322ENST00000641485 4530 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RNF111Q6ZNA4 RNU1-22P-201ENST00000363334 158 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 RNA5SP139-201ENST00000364340 117 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 RNU6-484P-201ENST00000384016 107 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 Y_RNA.584-201ENST00000391090 114 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 U6atac.2-201ENST00000408644 118 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 RN7SL807P-201ENST00000470923 297 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 RPL23AP91-201ENST00000569211 455 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 MIR5680-201ENST00000577577 84 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 MIR4438-201ENST00000585271 93 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF111Q6ZNA4 AC138915.1-201ENST00000565427 1685 ntBASIC3□□□□□ -1.93
RNF111Q6ZNA4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RNF111Q6ZNA4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3□□□□□ -1.93
RNF111Q6ZNA4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF111Q6ZNA4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 SNORA38.1-201ENST00000364172 131 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 RNA5SP387-201ENST00000364226 106 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 AC245047.4-201ENST00000433189 144 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 RPS4XP11-201ENST00000446897 772 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 CKS1BP2-201ENST00000497342 240 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 AC097462.1-201ENST00000514125 324 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 RNU2-34P-201ENST00000516534 121 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 RNU7-172P-201ENST00000517125 64 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 MIR7112-201ENST00000616126 65 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 AC009487.4-201ENST00000624969 3585 ntBASIC2.99□□□□□ -1.93
RNF111Q6ZNA4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 RNU6-235P-201ENST00000362644 107 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 RNU1-23P-201ENST00000363361 144 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 RNU6-978P-201ENST00000364371 103 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 SNORA25.7-201ENST00000364375 127 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 FO393413.1-201ENST00000402892 195 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 RNU2-52P-201ENST00000410680 190 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 RNU4-47P-201ENST00000410876 114 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 MICF-203ENST00000432679 129 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 MIR2682-201ENST00000580305 110 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 uc_338.25-201ENST00000613756 156 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 MIR7157-201ENST00000635801 60 ntBASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF111Q6ZNA4 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 RNU2-70P-201ENST00000410718 179 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 RNU2-55P-201ENST00000411146 174 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 AC025750.2-201ENST00000442609 450 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 RPL27AP5-201ENST00000469428 449 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 RNU6-991P-201ENST00000516168 107 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 uc_338.4-201ENST00000616635 176 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 MIR5739-201ENST00000619803 80 ntBASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF111Q6ZNA4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 RNU6-1056P-201ENST00000383996 107 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 MIR1253-201ENST00000408273 105 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 AL161788.1-201ENST00000441805 169 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 MTCO1P44-201ENST00000441935 243 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 AC245102.2-201ENST00000448956 180 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms