Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC244250.2-201ENST00000418731 148 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 Z98949.2-201ENST00000440996 144 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 MTND1P17-201ENST00000448961 204 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 snoU13.2-201ENST00000459201 104 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AP000870.1-201ENST00000472927 406 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RN7SKP19-201ENST00000516016 252 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNA5SP216-201ENST00000516111 123 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU7-43P-201ENST00000516554 64 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 MIR3925-201ENST00000584674 77 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AP000753.3-201ENST00000604083 169 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AC010999.1-201ENST00000611856 324 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 SNORA2.2-201ENST00000365473 135 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AL663109.1-201ENST00000411498 844 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC090844.1-201ENST00000422019 156 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC079354.2-201ENST00000453523 154 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC107934.1-201ENST00000522215 217 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC087894.1-201ENST00000538359 518 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 MIR3115-201ENST00000577915 68 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC090186.1-201ENST00000605991 572 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AL008636.1-201ENST00000625038 1018 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 AC068137.4-201ENST00000638485 296 ntBASIC-0.51□□□□□ -2.49
CSPG4Q6UVK1 RNU6-511P-201ENST00000363496 107 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 RNU6-245P-201ENST00000384020 107 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 RNU6-376P-201ENST00000384731 106 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC107297.1-201ENST00000459991 176 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AL445435.1-201ENST00000604232 665 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 SNORA67.2-201ENST00000384300 149 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 MIR873-201ENST00000401120 77 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 RNU6-370P-201ENST00000411008 104 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 MRPS10P2-201ENST00000431226 381 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC016632.1-201ENST00000503994 196 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 RNU6-287P-201ENST00000516230 98 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 SNORA31.14-201ENST00000516728 116 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC008521.1-201ENST00000587471 187 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 AC106754.1-201ENST00000562632 1513 ntBASIC-0.52□□□□□ -2.49
CSPG4Q6UVK1 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 MIR1298-201ENST00000408783 112 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC015818.7-201ENST00000428754 109 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 MTND1P32-201ENST00000433043 938 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC087499.7-201ENST00000441958 109 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU7-128P-201ENST00000517247 62 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 MTND2P38-201ENST00000522536 667 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC040926.1-201ENST00000530195 238 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 MIR4771-2-201ENST00000577758 74 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 MIR378D2-201ENST00000580636 98 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 MIR4771-1-201ENST00000582617 74 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU4-21P-201ENST00000362802 126 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU6-384P-201ENST00000364900 104 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU7-185P-201ENST00000459215 60 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU6-221P-201ENST00000459541 99 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RPL39P34-201ENST00000477141 156 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU6-150P-201ENST00000516237 95 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU7-156P-201ENST00000517214 74 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC025647.1-201ENST00000517879 253 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC010376.1-201ENST00000522101 334 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 FGF7P1-201ENST00000582820 288 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 SNORD92-201ENST00000585078 85 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 AC125232.2-201ENST00000592457 143 ntBASIC-0.53□□□□□ -2.49
CSPG4Q6UVK1 RNU6-371P-201ENST00000364283 108 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 RNU6-934P-201ENST00000365154 107 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 RNU6-24P-201ENST00000384440 107 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 MIR196A1-201ENST00000388006 70 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 HLA-S-202ENST00000425174 53 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 SNRPGP7-201ENST00000469016 106 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 MIR4639-201ENST00000584938 69 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 AC006380.1-201ENST00000603598 186 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 AC244669.1-204ENST00000621564 178 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 MTND4P9-201ENST00000507819 1346 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 RNU5B-1-201ENST00000363286 116 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 SNORD14.1-201ENST00000365609 90 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.54□□□□□ -2.5
CSPG4Q6UVK1 MIR516B2-201ENST00000385190 85 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms