Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 MTND5P41-201ENST00000517498 206 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 PRELID2P1-201ENST00000552837 301 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 AC006380.1-201ENST00000603598 186 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 U6.115-201ENST00000636045 103 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 FO624990.1-201ENST00000636373 85 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 RNU4-82P-201ENST00000362443 140 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 RNU6-944P-201ENST00000364023 107 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 RNY1P5-201ENST00000383890 115 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 RNU6-804P-201ENST00000384286 107 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 AL357139.1-201ENST00000407792 426 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 RNU6-789P-201ENST00000517105 102 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 AC136628.3-201ENST00000521868 290 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 AC100767.1-201ENST00000528178 123 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 MIR4765-201ENST00000585007 77 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 AL713866.2-201ENST00000603579 219 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 AL049779.4-201ENST00000604500 156 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 MIR7515-201ENST00000637837 67 ntBASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF549Q6P9A3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNU6-324P-201ENST00000363957 106 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 SNORA80E-201ENST00000384744 137 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC092427.1-202ENST00000430569 476 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNU7-200P-201ENST00000516105 62 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC009127.3-201ENST00000570531 403 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 MIR3144-201ENST00000579460 79 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 MIR4435-1-201ENST00000582552 80 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 RPL17P51-201ENST00000605218 238 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 SNORA19-201ENST00000384737 128 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 MIR29B2-201ENST00000385055 81 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 MIR1185-2-201ENST00000408687 86 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 MICF-203ENST00000432679 129 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 AC091021.1-201ENST00000468051 388 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 AC140059.1-201ENST00000489238 361 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 ATP5EP1-201ENST00000510257 156 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 RNA5SP112-201ENST00000515937 99 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 RNU6-346P-201ENST00000516288 111 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZNF549Q6P9A3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 RNU6-486P-201ENST00000363116 107 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 RNU6-461P-201ENST00000364195 107 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 SNORD113-1-201ENST00000365321 69 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 SNORA72.4-201ENST00000384174 132 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 RPL30P4-201ENST00000429309 333 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 MIR3616-201ENST00000584070 92 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC104465.1-201ENST00000611365 139 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC013791.1-201ENST00000616619 62 ntBASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF549Q6P9A3 AC010329.5-201ENST00000623497 2174 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 RNU6-381P-201ENST00000391259 108 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms