Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 Y_RNA.201-201ENST00000364052 96 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-1322P-201ENST00000364309 107 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.231-201ENST00000364358 102 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-522P-201ENST00000364497 107 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.296-201ENST00000364930 108 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 SNORA72.3-201ENST00000365074 132 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RNY3P9-201ENST00000384727 106 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RNA5SP482-201ENST00000391269 118 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 MIR320B2-201ENST00000408479 138 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RNA5SP494-201ENST00000410653 129 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RPL30P16-201ENST00000419341 429 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 USP9YP16-201ENST00000430287 407 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 USP9YP23-201ENST00000455085 407 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 AL118558.2-201ENST00000556294 238 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 MIR5696-201ENST00000578474 85 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-89P-201ENST00000606519 100 ntBASIC0.28□□□□□ -2.37
ARFGEF3Q5TH69 AC023934.1-201ENST00000574529 2389 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 RNU4-76P-201ENST00000364509 141 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-1329P-201ENST00000365664 107 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.476-201ENST00000384347 108 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 AC243428.1-201ENST00000421099 264 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 MTCO1P20-201ENST00000425366 358 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 MIR6718-201ENST00000616153 80 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.358-201ENST00000365491 99 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MTCYBP4-201ENST00000401524 249 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AL034345.1-201ENST00000407768 123 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 ZNF885P-201ENST00000420174 1098 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 USMG5P1-201ENST00000425964 177 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RPL23AP50-201ENST00000434149 455 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MTND4P32-201ENST00000437189 1237 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 Z98949.2-201ENST00000440996 144 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-197P-201ENST00000516680 100 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MIR5589-201ENST00000579442 60 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MIR4305-201ENST00000583252 102 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AC092747.3-201ENST00000603769 301 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AC017083.3-201ENST00000609955 700 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AC072046.2-201ENST00000618366 268 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AC022960.3-201ENST00000619794 441 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AC068137.3-201ENST00000639191 341 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU4-21P-201ENST00000362802 126 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-833P-201ENST00000363486 107 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.336-201ENST00000365307 109 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 SNORA36.2-201ENST00000384004 127 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 SNORA80D-201ENST00000384488 135 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-125P-201ENST00000384505 107 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 SNORA2B-201ENST00000384583 137 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MIR521-1-201ENST00000384902 87 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 SNORD41-201ENST00000386967 70 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 U8.16-201ENST00000391279 133 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-648P-201ENST00000410190 107 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 USP9YP29-201ENST00000445112 563 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 snoU13.21-201ENST00000459368 105 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-261P-201ENST00000459506 102 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-430P-201ENST00000517078 107 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 EIF1P4-201ENST00000572664 335 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 MIR4764-201ENST00000580680 88 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 AL360219.1-201ENST00000610230 366 ntBASIC0.26□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.2-201ENST00000362330 96 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 SNORD113-7-201ENST00000363762 77 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-923P-201ENST00000364753 107 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 SNORA69-201ENST00000383895 132 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.533-201ENST00000384596 114 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-331P-201ENST00000384724 107 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-1067P-201ENST00000384752 107 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 MIR517A-201ENST00000385001 87 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AL590002.1-201ENST00000406554 418 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AL392103.1-201ENST00000447000 198 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 snoU13.19-201ENST00000459148 104 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 TRBVB-201ENST00000477100 408 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 MTCO2P30-201ENST00000503662 364 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC093303.1-201ENST00000514549 295 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AL358944.1-201ENST00000528537 144 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC023157.2-201ENST00000540596 141 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 U6.73-201ENST00000619194 103 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AL078596.1-201ENST00000624856 447 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-282P-201ENST00000365357 103 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms