Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RPS26P45-201ENST00000471748 340 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 RPS27P22-201ENST00000478056 241 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 RNA5SP481-201ENST00000516814 122 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AC055872.1-201ENST00000570978 278 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 MIR4438-201ENST00000585271 93 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AL356055.1-201ENST00000602528 446 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 SNRPGP19-201ENST00000603826 189 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AC124312.5-201ENST00000604451 268 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 AC022441.3-201ENST00000605737 136 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 U6.108-201ENST00000637764 58 ntBASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
LRIF1Q5T3J3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 RNU4-82P-201ENST00000362443 140 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.471-201ENST00000384312 102 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 RNU6-823P-201ENST00000391042 103 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 RNU6-101P-201ENST00000410323 104 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 MTND1P14-201ENST00000427400 950 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 AL121890.1-201ENST00000435457 205 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 SNORA70.12-201ENST00000516084 153 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 AC104695.3-201ENST00000604052 296 ntBASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
LRIF1Q5T3J3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 SNORA33-201ENST00000363664 130 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 SNORD115-30-201ENST00000364117 82 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 MIR1252-201ENST00000408861 65 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 RNU7-94P-201ENST00000459576 63 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 AL163195.1-201ENST00000496941 348 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 RNA5SP20-201ENST00000515976 84 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 Y_RNA.715-201ENST00000517082 110 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 RNU7-128P-201ENST00000517247 62 ntBASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.78□□□□□ -2.12
LRIF1Q5T3J3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.389-201ENST00000383924 113 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNU6-360P-201ENST00000390944 104 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNU2-7P-201ENST00000410794 178 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNA5SP508-201ENST00000411327 119 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RPL23AP36-201ENST00000413895 458 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 DPH3P2-201ENST00000422618 250 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 AC097462.1-201ENST00000514125 324 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 AC023157.2-201ENST00000540596 141 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 AL442663.2-201ENST00000554385 511 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 AC040896.1-201ENST00000613819 479 ntBASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LRIF1Q5T3J3 RNU1-22P-201ENST00000363334 158 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 SNORA33.2-201ENST00000365413 134 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 RNU2-20P-201ENST00000410425 191 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 FTH1P12-201ENST00000432137 551 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 AC005042.3-201ENST00000453230 174 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 RPL36AP21-201ENST00000490372 323 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 RPL23AP63-201ENST00000498752 471 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 RNU6-155P-201ENST00000516347 100 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 RNU7-172P-201ENST00000517125 64 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 AC027419.1-201ENST00000522976 328 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 AC016925.2-201ENST00000605108 242 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 AL590808.1-201ENST00000618696 141 ntBASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
LRIF1Q5T3J3 Y_RNA.216-201ENST00000364205 93 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RNU6-407P-201ENST00000365280 104 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RNU6-950P-201ENST00000384651 107 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AL031003.1-201ENST00000404229 172 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RN7SKP223-201ENST00000410582 62 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RN7SKP192-201ENST00000411291 327 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 HSPE1P9-201ENST00000440046 311 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 HSPE1P13-201ENST00000451143 297 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RPS26P55-201ENST00000471178 356 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AC107393.1-201ENST00000512403 346 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RNA5SP437-201ENST00000517249 129 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 RPL21P9-201ENST00000556149 474 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AC011373.1-201ENST00000607270 237 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AL021879.1-201ENST00000611756 288 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 AC064859.1-201ENST00000624741 174 ntBASIC1.75□□□□□ -2.13
LRIF1Q5T3J3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms