Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 RNA5SP508-201ENST00000411327 119 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 BX510359.4-201ENST00000423750 193 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AL353689.1-201ENST00000438895 199 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 RPL23AP3-201ENST00000453844 468 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 RNU7-14P-201ENST00000459331 62 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 ATP5EP1-201ENST00000510257 156 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1023P-201ENST00000516137 106 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AP005660.1-201ENST00000522972 293 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 IGKV3-31-201ENST00000523109 329 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AC008749.1-201ENST00000597650 306 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 AC064859.1-201ENST00000624741 174 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 MIR1248-201ENST00000629190 106 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU6-545P-201ENST00000362681 104 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU6-454P-201ENST00000364292 107 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 SNORA72.2-201ENST00000365028 127 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1318P-201ENST00000365389 103 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU6-326P-201ENST00000365480 107 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.416-201ENST00000384014 113 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.478-201ENST00000384358 107 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 SNORD14D-201ENST00000384390 87 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 MIR29C-201ENST00000385231 88 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 MIR300-201ENST00000401138 83 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU2-54P-201ENST00000410299 190 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNA5SP425-201ENST00000410336 112 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 AC245102.2-201ENST00000448956 180 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 AC005042.3-201ENST00000453230 174 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 MTND4LP30-201ENST00000454092 297 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 HMGN2P9-201ENST00000476875 229 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 SERF1AP1-201ENST00000514575 187 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU6-991P-201ENST00000516168 107 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 RNU6-107P-201ENST00000516643 102 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 MIR4299-201ENST00000577899 72 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 MIR4435-1-201ENST00000582552 80 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 AC005357.1-201ENST00000588399 301 ntBASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 SNORD31B-201ENST00000364977 69 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.477-201ENST00000384352 108 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNU11-3P-201ENST00000391111 133 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 SNORD58.1-201ENST00000391313 66 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 MIR1283-1-201ENST00000408494 87 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 MIR1283-2-201ENST00000408621 87 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 HMGN2P19-201ENST00000425149 265 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 TOMM22P2-201ENST00000430735 237 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 HMGN2P3-201ENST00000433603 273 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 HMGN2P5-201ENST00000436882 273 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNU2-31P-201ENST00000516954 155 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNU6-388P-201ENST00000517012 105 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNU6-389P-201ENST00000517048 105 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 RNU2-12P-201ENST00000517216 168 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 SNRPGP19-201ENST00000603826 189 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AC010900.2-201ENST00000604508 210 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AC090425.1-201ENST00000610007 140 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AC006001.4-201ENST00000622243 395 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 AC009487.4-201ENST00000624969 3585 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 SNORA20.1-201ENST00000364790 130 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 MIR597-201ENST00000384968 97 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 AL603910.2-201ENST00000407268 136 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 MIR1185-2-201ENST00000408687 86 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 MIR548H3-201ENST00000408771 118 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 RNU6-847P-201ENST00000411115 108 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 HMGN2P18-201ENST00000450680 270 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 AC016925.1-201ENST00000458303 298 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 RPL23AP42-201ENST00000471152 471 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 MIR219B-201ENST00000637023 88 ntBASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
SNAI3Q3KNW1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms