Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 RNU6-975P-201ENST00000384296 105 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 Y_RNA.574-201ENST00000384766 95 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 MIR568-201ENST00000385036 95 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDS5AQ29RF7 RNA5SP475-201ENST00000410568 110 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 SRIP3-201ENST00000413200 219 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 AC123900.1-201ENST00000420390 96 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 RAB28P5-201ENST00000427490 651 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 AC005002.2-201ENST00000438228 269 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 DYNLT3P2-201ENST00000442517 295 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 LINC01399-202ENST00000458450 244 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 AC025465.3-201ENST00000510570 311 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 RNY3P15-201ENST00000516297 97 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.05□□□□□ -2.08
PDS5AQ29RF7 AC136932.1-201ENST00000574771 208 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 MIR3618-201ENST00000580330 88 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.05□□□□□ -2.08
PDS5AQ29RF7 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 AC130454.1-201ENST00000622948 401 ntBASIC2.05□□□□□ -2.08
PDS5AQ29RF7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
PDS5AQ29RF7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PDS5AQ29RF7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PDS5AQ29RF7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PDS5AQ29RF7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PDS5AQ29RF7 Y_RNA.149-201ENST00000363558 117 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 SNORD48-201ENST00000364953 64 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 RNU6-806P-201ENST00000365147 105 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 MIR1185-2-201ENST00000408687 86 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 RNU6-121P-201ENST00000410525 99 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.04□□□□□ -2.08
PDS5AQ29RF7 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 MTCYBP9-201ENST00000431021 303 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 RNU7-57P-201ENST00000459540 60 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 AC114982.1-201ENST00000469402 321 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 RNU6-948P-201ENST00000516374 107 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.04□□□□□ -2.08
PDS5AQ29RF7 AC012493.3-201ENST00000604494 112 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 AC004467.1-201ENST00000615678 330 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 MIR3674-201ENST00000636576 68 ntBASIC2.04□□□□□ -2.08
PDS5AQ29RF7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDS5AQ29RF7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDS5AQ29RF7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 Y_RNA.105-201ENST00000363182 111 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 RNU6-238P-201ENST00000363313 106 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 RNU6-937P-201ENST00000384325 106 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 EDDM3CP-201ENST00000415977 425 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 AL390729.2-201ENST00000416137 156 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 TOMM22P2-201ENST00000430735 237 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 MTCO1P44-201ENST00000441935 243 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 RNU6-107P-201ENST00000516643 102 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 AP002001.1-203ENST00000534002 267 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 AC055872.1-201ENST00000570978 278 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 MIR4300-201ENST00000581016 96 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.03□□□□□ -2.08
PDS5AQ29RF7 AC005176.2-201ENST00000596933 147 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
PDS5AQ29RF7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDS5AQ29RF7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
PDS5AQ29RF7 RNU6-457P-201ENST00000363999 107 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 RNU1-148P-201ENST00000384472 162 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.02□□□□□ -2.09
PDS5AQ29RF7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.02□□□□□ -2.09
PDS5AQ29RF7 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 AC074290.1-201ENST00000448883 135 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 RNU2-34P-201ENST00000516534 121 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.02□□□□□ -2.09
PDS5AQ29RF7 AC022441.3-201ENST00000605737 136 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 MIR376A1-201ENST00000616574 68 ntBASIC2.02□□□□□ -2.09
PDS5AQ29RF7 MIR340-201ENST00000362125 95 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 RNU6-454P-201ENST00000364292 107 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 RNU6-418P-201ENST00000384035 107 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 RNU6-463P-201ENST00000384340 107 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 RNU6-498P-201ENST00000459468 107 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 RNU6-221P-201ENST00000459541 99 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AC098869.1-201ENST00000481627 292 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.01□□□□□ -2.09
PDS5AQ29RF7 SEPT14P8-201ENST00000508026 178 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AP003733.2-201ENST00000529409 171 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AL161670.1-201ENST00000554348 137 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AL109918.3-201ENST00000603072 338 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 AC011373.1-201ENST00000607270 237 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 MIR8062-201ENST00000621515 85 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 snoZ196.1-201ENST00000625269 89 ntBASIC2.01□□□□□ -2.09
PDS5AQ29RF7 Y_RNA.99-201ENST00000363138 105 ntBASIC2□□□□□ -2.09
PDS5AQ29RF7 RNU6-1175P-201ENST00000365200 107 ntBASIC2□□□□□ -2.09
PDS5AQ29RF7 MIR1262-201ENST00000408276 93 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms