Protein–RNA interactions for Protein: Q13011

ECH1, Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1Q13011 SNORA31.4-201ENST00000516049 129 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 CBX3P8-201ENST00000532412 525 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 MIR5701-3-201ENST00000578890 82 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
ECH1Q13011 MIR5701-1-201ENST00000585138 82 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 AL357075.2-201ENST00000614906 189 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 MIR5701-2-201ENST00000615634 82 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ECH1Q13011 MTND5P16-201ENST00000460269 1703 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 MIRLET7C-201ENST00000362160 84 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 Y_RNA.4-201ENST00000362333 112 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 RNU6-1145P-201ENST00000384246 107 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 RNU6-1001P-201ENST00000411265 100 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.82□□□□□ -2.28
ECH1Q13011 USP9YP16-201ENST00000430287 407 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 USP9YP23-201ENST00000455085 407 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.82□□□□□ -2.28
ECH1Q13011 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC093534.1-201ENST00000504977 132 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC018710.1-201ENST00000506509 158 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 RNU6-341P-201ENST00000516973 96 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC100812.1-201ENST00000607622 580 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC015540.1-201ENST00000615828 501 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 AC005592.1-201ENST00000566527 1640 ntBASIC0.82□□□□□ -2.28
ECH1Q13011 Y_RNA.9-201ENST00000362354 101 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 SNORA27.1-201ENST00000362604 124 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 Y_RNA.450-201ENST00000384198 113 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 MIR222-201ENST00000384992 110 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.81□□□□□ -2.28
ECH1Q13011 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.81□□□□□ -2.28
ECH1Q13011 Y_RNA.706-201ENST00000516933 99 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AP002001.1-203ENST00000534002 267 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AL121579.1-201ENST00000555129 305 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.81□□□□□ -2.28
ECH1Q13011 AC090617.3-201ENST00000573670 475 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 MIR6128-201ENST00000615528 109 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 AC100810.6-201ENST00000638068 285 ntBASIC0.81□□□□□ -2.28
ECH1Q13011 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ECH1Q13011 RNU6-874P-201ENST00000362390 105 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 SNORA1B-201ENST00000362535 133 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 Y_RNA.265-201ENST00000364677 108 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 SNORA2.2-201ENST00000365473 135 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 RNU6-1264P-201ENST00000383891 107 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 AC022493.2-201ENST00000506122 481 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 RNA5SP20-201ENST00000515976 84 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 RNU7-28P-201ENST00000516759 62 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 RNU1-54P-201ENST00000517181 120 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.8□□□□□ -2.28
ECH1Q13011 AL117336.2-201ENST00000602435 335 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 AC005014.2-201ENST00000607795 599 ntBASIC0.8□□□□□ -2.28
ECH1Q13011 MIR410-201ENST00000362222 80 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 Y_RNA.124-201ENST00000363339 93 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 Y_RNA.157-201ENST00000363638 102 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 RNU6-117P-201ENST00000365415 107 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 RNU6-1080P-201ENST00000383982 107 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 MIR190B-201ENST00000401119 79 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 RNU5A-5P-201ENST00000411054 116 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 AC016907.1-201ENST00000419483 435 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 AC018865.2-201ENST00000423631 129 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 AC026782.1-201ENST00000512952 449 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 RPL21P9-201ENST00000556149 474 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 EIF1P4-201ENST00000572664 335 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 AC080013.6-201ENST00000606185 215 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 MIR3662-201ENST00000637030 95 ntBASIC0.79□□□□□ -2.28
ECH1Q13011 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
ECH1Q13011 Y_RNA.267-201ENST00000364679 109 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.78□□□□□ -2.28
ECH1Q13011 RNU6-969P-201ENST00000383900 105 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 Y_RNA.436-201ENST00000384097 102 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 Y_RNA.473-201ENST00000384333 102 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 MTCYBP4-201ENST00000401524 249 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 AL451046.2-201ENST00000403074 277 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 RNA5SP118-201ENST00000410385 109 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.78□□□□□ -2.28
ECH1Q13011 MTND4LP16-201ENST00000440828 295 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 Z98949.2-201ENST00000440996 144 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 AL137792.2-201ENST00000443484 235 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 U8.22-201ENST00000459141 133 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 MTND5P5-201ENST00000503764 376 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 RNU6-947P-201ENST00000516264 106 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 RNU6-113P-201ENST00000516653 101 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 MIR3684-201ENST00000579779 74 ntBASIC0.78□□□□□ -2.28
ECH1Q13011 AC005828.6-201ENST00000606610 232 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms