Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.140-201ENST00000363474 103 ntBASIC2.2□□□□□ -2.06
LTBQ06643 RNU6-944P-201ENST00000364023 107 ntBASIC2.2□□□□□ -2.06
LTBQ06643 RNU6-1274P-201ENST00000384557 107 ntBASIC2.2□□□□□ -2.06
LTBQ06643 COX6CP10-201ENST00000416832 224 ntBASIC2.2□□□□□ -2.06
LTBQ06643 AL356320.1-201ENST00000429616 163 ntBASIC2.2□□□□□ -2.06
LTBQ06643 AL445687.1-201ENST00000439946 251 ntBASIC2.2□□□□□ -2.06
LTBQ06643 RNU7-120P-201ENST00000459334 63 ntBASIC2.2□□□□□ -2.06
LTBQ06643 AP002392.1-201ENST00000537692 208 ntBASIC2.2□□□□□ -2.06
LTBQ06643 AL356280.1-201ENST00000603614 379 ntBASIC2.2□□□□□ -2.06
LTBQ06643 AL670379.2-201ENST00000604983 252 ntBASIC2.2□□□□□ -2.06
LTBQ06643 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.2□□□□□ -2.06
LTBQ06643 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
LTBQ06643 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LTBQ06643 RNU6-486P-201ENST00000363116 107 ntBASIC2.19□□□□□ -2.06
LTBQ06643 VTRNA1-1-201ENST00000363120 99 ntBASIC2.19□□□□□ -2.06
LTBQ06643 RNU6-682P-201ENST00000363843 106 ntBASIC2.19□□□□□ -2.06
LTBQ06643 RNU6-1305P-201ENST00000364353 104 ntBASIC2.19□□□□□ -2.06
LTBQ06643 RNU6-923P-201ENST00000364753 107 ntBASIC2.19□□□□□ -2.06
LTBQ06643 RNU6-211P-201ENST00000384047 107 ntBASIC2.19□□□□□ -2.06
LTBQ06643 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
LTBQ06643 RNU6-493P-201ENST00000391321 108 ntBASIC2.19□□□□□ -2.06
LTBQ06643 RN7SKP51-201ENST00000410781 304 ntBASIC2.19□□□□□ -2.06
LTBQ06643 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.19□□□□□ -2.06
LTBQ06643 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
LTBQ06643 CR769767.1-201ENST00000436337 346 ntBASIC2.19□□□□□ -2.06
LTBQ06643 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
LTBQ06643 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.19□□□□□ -2.06
LTBQ06643 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
LTBQ06643 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.19□□□□□ -2.06
LTBQ06643 AC006380.1-201ENST00000603598 186 ntBASIC2.19□□□□□ -2.06
LTBQ06643 AL008718.3-201ENST00000610217 321 ntBASIC2.19□□□□□ -2.06
LTBQ06643 AC073349.3-201ENST00000617616 186 ntBASIC2.19□□□□□ -2.06
LTBQ06643 U4.3-201ENST00000621047 82 ntBASIC2.19□□□□□ -2.06
LTBQ06643 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LTBQ06643 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LTBQ06643 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.18□□□□□ -2.06
LTBQ06643 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LTBQ06643 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LTBQ06643 RNU6-545P-201ENST00000362681 104 ntBASIC2.18□□□□□ -2.06
LTBQ06643 RNU6-324P-201ENST00000363957 106 ntBASIC2.18□□□□□ -2.06
LTBQ06643 SNORD115-30-201ENST00000364117 82 ntBASIC2.18□□□□□ -2.06
LTBQ06643 Y_RNA.243-201ENST00000364481 109 ntBASIC2.18□□□□□ -2.06
LTBQ06643 MIR29B2-201ENST00000385055 81 ntBASIC2.18□□□□□ -2.06
LTBQ06643 RNU6-918P-201ENST00000391219 106 ntBASIC2.18□□□□□ -2.06
LTBQ06643 AL031003.1-201ENST00000404229 172 ntBASIC2.18□□□□□ -2.06
LTBQ06643 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
LTBQ06643 AL135790.2-201ENST00000437701 267 ntBASIC2.18□□□□□ -2.06
LTBQ06643 NDUFB4P10-201ENST00000452541 359 ntBASIC2.18□□□□□ -2.06
LTBQ06643 Y_RNA.637-201ENST00000459424 114 ntBASIC2.18□□□□□ -2.06
LTBQ06643 AC074198.2-201ENST00000508153 258 ntBASIC2.18□□□□□ -2.06
LTBQ06643 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
LTBQ06643 AC108729.3-201ENST00000513484 108 ntBASIC2.18□□□□□ -2.06
LTBQ06643 RNU6-861P-201ENST00000516745 106 ntBASIC2.18□□□□□ -2.06
LTBQ06643 AC087441.2-201ENST00000529141 262 ntBASIC2.18□□□□□ -2.06
LTBQ06643 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.18□□□□□ -2.06
LTBQ06643 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.18□□□□□ -2.06
LTBQ06643 AL713866.2-201ENST00000603579 219 ntBASIC2.18□□□□□ -2.06
LTBQ06643 Z83818.1-201ENST00000603584 150 ntBASIC2.18□□□□□ -2.06
LTBQ06643 AC008873.1-201ENST00000625051 138 ntBASIC2.18□□□□□ -2.06
LTBQ06643 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
LTBQ06643 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
LTBQ06643 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LTBQ06643 U3.8-201ENST00000363675 217 ntBASIC2.17□□□□□ -2.06
LTBQ06643 Y_RNA.466-201ENST00000384294 113 ntBASIC2.17□□□□□ -2.06
LTBQ06643 Y_RNA.508-201ENST00000384502 114 ntBASIC2.17□□□□□ -2.06
LTBQ06643 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LTBQ06643 AL359511.1-201ENST00000402970 211 ntBASIC2.17□□□□□ -2.06
LTBQ06643 AC007064.1-201ENST00000412238 351 ntBASIC2.17□□□□□ -2.06
LTBQ06643 AC024067.1-201ENST00000426199 223 ntBASIC2.17□□□□□ -2.06
LTBQ06643 TOMM22P2-201ENST00000430735 237 ntBASIC2.17□□□□□ -2.06
LTBQ06643 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LTBQ06643 AC104332.1-201ENST00000440471 797 ntBASIC2.17□□□□□ -2.06
LTBQ06643 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.17□□□□□ -2.06
LTBQ06643 HMGN2P23-201ENST00000456759 269 ntBASIC2.17□□□□□ -2.06
LTBQ06643 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
LTBQ06643 RNU5F-4P-201ENST00000516581 114 ntBASIC2.17□□□□□ -2.06
LTBQ06643 MIR4308-201ENST00000580634 81 ntBASIC2.17□□□□□ -2.06
LTBQ06643 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
LTBQ06643 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.17□□□□□ -2.06
LTBQ06643 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
LTBQ06643 U6.115-201ENST00000636045 103 ntBASIC2.17□□□□□ -2.06
LTBQ06643 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LTBQ06643 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LTBQ06643 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
LTBQ06643 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LTBQ06643 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
LTBQ06643 RNU6-1272P-201ENST00000362776 107 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RNU6-1020P-201ENST00000363684 107 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RNU6-801P-201ENST00000364087 105 ntBASIC2.16□□□□□ -2.06
LTBQ06643 Y_RNA.308-201ENST00000365043 101 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RNU1-51P-201ENST00000365345 176 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.16□□□□□ -2.06
LTBQ06643 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.16□□□□□ -2.06
LTBQ06643 U8.19-201ENST00000459095 133 ntBASIC2.16□□□□□ -2.06
LTBQ06643 RNU7-14P-201ENST00000459331 62 ntBASIC2.16□□□□□ -2.06
LTBQ06643 AC080013.2-201ENST00000460866 323 ntBASIC2.16□□□□□ -2.06
LTBQ06643 HMGN2P9-201ENST00000476875 229 ntBASIC2.16□□□□□ -2.06
LTBQ06643 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.16□□□□□ -2.06
LTBQ06643 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.16□□□□□ -2.06
LTBQ06643 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms