Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 Y_RNA.142-201ENST00000363491 102 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 RNU6-1188P-201ENST00000363795 107 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 Y_RNA.287-201ENST00000364853 94 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 SNORA72.2-201ENST00000365028 127 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 RNA5SP109-201ENST00000391010 116 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 RNU6-1050P-201ENST00000410388 107 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 RNU6-1186P-201ENST00000410429 97 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 RNU6-370P-201ENST00000411008 104 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 AL353997.1-201ENST00000432936 108 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 DAP3P1-201ENST00000441522 278 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.28□□□□□ -2.2
CSTF1Q05048 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.28□□□□□ -2.2
CSTF1Q05048 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
CSTF1Q05048 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 UBL5P4-201ENST00000562584 236 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 FRG2DP-202ENST00000566967 323 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 AL355375.2-201ENST00000574825 175 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 AP001094.1-201ENST00000579805 193 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CSTF1Q05048 AL117336.2-201ENST00000602435 335 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 Y_RNA.804-201ENST00000615262 101 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
CSTF1Q05048 SNORD33-201ENST00000362761 85 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNU6-873P-201ENST00000363833 107 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNU6-1013P-201ENST00000384180 107 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNU6-310P-201ENST00000384655 107 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 MIR153-2-201ENST00000385225 87 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 SNORA75.4-201ENST00000391278 119 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNA5SP504-201ENST00000410676 117 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RPL37P10-201ENST00000412884 288 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AC074085.1-201ENST00000413598 418 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AF228730.4-201ENST00000421457 183 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 MTND4LP11-201ENST00000422184 280 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 MRPS18CP6-201ENST00000423587 223 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AC010154.1-201ENST00000425857 269 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.27□□□□□ -2.21
CSTF1Q05048 MTND5P20-201ENST00000448677 143 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AL163195.1-201ENST00000496941 348 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNU6-344P-201ENST00000516635 111 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 Y_RNA.702-201ENST00000516843 96 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 RNU6-58P-201ENST00000517143 103 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AC027419.1-201ENST00000522976 328 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AK6P2-201ENST00000549020 471 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AC027288.2-201ENST00000553028 243 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.27□□□□□ -2.21
CSTF1Q05048 AL669831.3-213ENST00000636676 183 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 MIR1302-1-201ENST00000637932 143 ntBASIC1.27□□□□□ -2.21
CSTF1Q05048 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CSTF1Q05048 MTND4P12-201ENST00000498999 1377 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 MIR302D-201ENST00000362275 68 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RNU6-595P-201ENST00000363944 107 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RNY3P11-201ENST00000364153 102 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RNU6-1240P-201ENST00000365155 104 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RNU6-1080P-201ENST00000383982 107 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RNU6-890P-201ENST00000384121 107 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AC008134.1-201ENST00000420943 193 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AC005002.2-201ENST00000438228 269 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 CHEK2P4-201ENST00000450340 246 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AC107399.1-201ENST00000451226 265 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 RNU1-142P-201ENST00000516682 145 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AC025647.1-201ENST00000517879 253 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.26□□□□□ -2.21
CSTF1Q05048 MIR5701-3-201ENST00000578890 82 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 MIR5701-1-201ENST00000585138 82 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 LARP7P1-201ENST00000605576 316 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 AL355802.3-201ENST00000607571 545 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 MIR5701-2-201ENST00000615634 82 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
CSTF1Q05048 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 RNU6-596P-201ENST00000365395 98 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 Y_RNA.415-201ENST00000384012 112 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 Y_RNA.419-201ENST00000384041 102 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 Y_RNA.482-201ENST00000384377 111 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 Y_RNA.509-201ENST00000384506 99 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 MIR515-2-201ENST00000384883 83 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 MIR515-1-201ENST00000384884 83 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 MIR513A1-201ENST00000385138 129 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 AC016909.1-201ENST00000415916 166 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 AL139396.1-201ENST00000421137 167 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 Y_RNA.632-201ENST00000459189 102 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 FGF7P4-201ENST00000509595 295 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 RNA5SP436-201ENST00000516020 115 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 RNU6-559P-201ENST00000516151 98 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 RNU6-107P-201ENST00000516643 102 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 RNU6-1198P-201ENST00000516904 67 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 AC005668.1-201ENST00000571142 476 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 AL929325.1-201ENST00000603096 117 ntBASIC1.25□□□□□ -2.21
CSTF1Q05048 Y_RNA.2-201ENST00000362330 96 ntBASIC1.24□□□□□ -2.21
CSTF1Q05048 RNU4-73P-201ENST00000363164 141 ntBASIC1.24□□□□□ -2.21
CSTF1Q05048 Y_RNA.263-201ENST00000364659 114 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms