Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RPS27P22-201ENST00000478056 241 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 AC010469.2-201ENST00000496412 480 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 RNU1-142P-201ENST00000516682 145 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 AC023442.1-201ENST00000531247 422 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.72□□□□□ -2.13
CDK3Q00526 AC023157.2-201ENST00000540596 141 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.72□□□□□ -2.13
CDK3Q00526 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.72□□□□□ -2.13
CDK3Q00526 SNORD58B-201ENST00000607313 66 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 AC007485.1-201ENST00000616755 206 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 AL353997.5-201ENST00000618886 171 ntBASIC1.72□□□□□ -2.13
CDK3Q00526 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
CDK3Q00526 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDK3Q00526 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CDK3Q00526 RNU6-454P-201ENST00000364292 107 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 SNORA20B-201ENST00000384220 132 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 AL355796.1-201ENST00000406706 323 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.71□□□□□ -2.14
CDK3Q00526 AL163195.1-201ENST00000496941 348 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 AC024995.1-201ENST00000523014 93 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 MIR3684-201ENST00000579779 74 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 MIR4438-201ENST00000585271 93 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 AC004467.1-201ENST00000615678 330 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 AC240442.1-201ENST00000616055 283 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 U6.73-201ENST00000619194 103 ntBASIC1.71□□□□□ -2.14
CDK3Q00526 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
CDK3Q00526 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 SNORA63D-201ENST00000364359 132 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 RNA5SP190-201ENST00000365222 118 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 Y_RNA.394-201ENST00000383942 103 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 SDAD1P3-201ENST00000427380 333 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AC005002.2-201ENST00000438228 269 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
CDK3Q00526 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.7□□□□□ -2.14
CDK3Q00526 SNORA40.14-201ENST00000516543 86 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 GNAI2P1-201ENST00000541815 315 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AC055872.1-201ENST00000570978 278 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 MIR4255-201ENST00000579351 72 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.7□□□□□ -2.14
CDK3Q00526 RPS29P30-201ENST00000600975 111 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 AC006435.5-201ENST00000624486 112 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 U6.115-201ENST00000636045 103 ntBASIC1.7□□□□□ -2.14
CDK3Q00526 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDK3Q00526 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDK3Q00526 Y_RNA.31-201ENST00000362574 102 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 RNU6-626P-201ENST00000363354 107 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 RNU6-20P-201ENST00000384106 107 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 MRPL35P1-201ENST00000404272 572 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 MCFD2P1-201ENST00000417812 300 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 AC073910.1-201ENST00000445047 438 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 MRPS10P1-201ENST00000448483 130 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 RN7SKP295-201ENST00000517264 153 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 AC005176.2-201ENST00000596933 147 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 U6.108-201ENST00000637764 58 ntBASIC1.69□□□□□ -2.14
CDK3Q00526 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CDK3Q00526 RNU6-407P-201ENST00000365280 104 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.68□□□□□ -2.14
CDK3Q00526 MTND1P14-201ENST00000427400 950 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
CDK3Q00526 MTND4P19-201ENST00000446659 478 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 RPL36AP21-201ENST00000490372 323 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 RNU7-99P-201ENST00000516271 62 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CDK3Q00526 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDK3Q00526 AC091812.1-201ENST00000432235 1948 ntBASIC1.68□□□□□ -2.14
CDK3Q00526 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CDK3Q00526 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.67□□□□□ -2.14
CDK3Q00526 SNORA27.1-201ENST00000362604 124 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 RNU6-474P-201ENST00000384243 107 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 RNA5SP109-201ENST00000391010 116 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 PMCHL1-202ENST00000423102 261 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 Y_RNA.631-201ENST00000459607 101 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 RNA5SP20-201ENST00000515976 84 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 RNA5SP481-201ENST00000516814 122 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 RNU7-128P-201ENST00000517247 62 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.67□□□□□ -2.14
CDK3Q00526 AC006380.1-201ENST00000603598 186 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.67□□□□□ -2.14
CDK3Q00526 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CDK3Q00526 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CDK3Q00526 AC005592.1-201ENST00000566527 1640 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
CDK3Q00526 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 Y_RNA.101-201ENST00000363154 102 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 Y_RNA.138-201ENST00000363462 102 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 RNU6-271P-201ENST00000363858 105 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 Y_RNA.243-201ENST00000364481 109 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 Y_RNA.526-201ENST00000384572 110 ntBASIC1.66□□□□□ -2.14
CDK3Q00526 MTCO2P12-201ENST00000427426 682 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms