Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ZNF321P-202ENST00000550843 495 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC026470.2-201ENST00000561492 181 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL117336.2-201ENST00000602435 335 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNU6-552P-201ENST00000362869 119 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RNA5SP95-201ENST00000410319 137 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL392103.1-201ENST00000447000 198 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 RPL39P25-201ENST00000449384 154 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL031274.1-201ENST00000450334 232 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC079395.1-201ENST00000510981 262 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.57□□□□□ -2.5
PRKDCP78527 Z99289.3-201ENST00000605586 594 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 AL096861.1-201ENST00000610899 123 ntBASIC-0.57□□□□□ -2.5
PRKDCP78527 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNU6-811P-201ENST00000384069 107 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.58□□□□□ -2.5
PRKDCP78527 AC245008.1-201ENST00000608123 476 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 MIR6129-201ENST00000616087 109 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 SNORA33-201ENST00000363664 130 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNU6-343P-201ENST00000364709 104 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 MIR15B-201ENST00000385045 98 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 SNORD41-201ENST00000386967 70 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.58□□□□□ -2.5
PRKDCP78527 AC091951.3-201ENST00000504093 246 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNA5SP470-201ENST00000516463 106 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 RNU6-881P-201ENST00000516813 102 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 ADI1P3-201ENST00000549509 470 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 MIR548AC-201ENST00000585049 88 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 AC084368.1-201ENST00000620935 65 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 AC138649.3-201ENST00000622154 254 ntBASIC-0.58□□□□□ -2.5
PRKDCP78527 MT-TN-201ENST00000387400 73 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 RNA5SP482-201ENST00000391269 118 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 MTCYBP2-201ENST00000407745 171 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.59□□□□□ -2.5
PRKDCP78527 AC091178.2-201ENST00000584401 117 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 AC107905.1-201ENST00000616204 426 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 MIR101-2-201ENST00000362195 79 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 U3.4-201ENST00000363352 213 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 RNU6-245P-201ENST00000384020 107 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 MIR136-201ENST00000385207 82 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 AC243428.1-201ENST00000421099 264 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 AC006600.1-201ENST00000572529 153 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 AC022306.2-201ENST00000617563 647 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
PRKDCP78527 AC117470.1-201ENST00000381974 330 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 MIR1257-201ENST00000408490 117 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 ZNF114P1-201ENST00000453500 292 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 MTND2P38-201ENST00000522536 667 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 AL358944.1-201ENST00000528537 144 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 MIR4306-201ENST00000583390 91 ntBASIC-0.59□□□□□ -2.5
PRKDCP78527 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.6□□□□□ -2.5
PRKDCP78527 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 MIR124-2-201ENST00000385081 109 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 MTND3P20-201ENST00000407663 186 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 SSR1P2-201ENST00000415208 787 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 AC012306.1-201ENST00000423267 114 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 MTND4P24-201ENST00000424002 397 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.6□□□□□ -2.5
PRKDCP78527 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.6□□□□□ -2.5
PRKDCP78527 MIR5706-201ENST00000579841 80 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 AC234772.3-201ENST00000602277 528 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 AC010975.3-201ENST00000618727 978 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 AC106754.1-201ENST00000562632 1513 ntBASIC-0.6□□□□□ -2.5
PRKDCP78527 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
PRKDCP78527 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.6□□□□□ -2.51
PRKDCP78527 AC021146.6-201ENST00000514659 117 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.6□□□□□ -2.51
PRKDCP78527 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.6□□□□□ -2.51
PRKDCP78527 MIR4677-201ENST00000584153 80 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 AC093726.3-201ENST00000637588 150 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 MIR563-201ENST00000385080 79 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 UQCRBP2-201ENST00000447827 297 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 RPL39P34-201ENST00000477141 156 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 AC010424.1-201ENST00000506336 297 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 AC115989.2-201ENST00000578640 563 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 AC022893.3-201ENST00000607665 437 ntBASIC-0.6□□□□□ -2.51
PRKDCP78527 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 SNORA63C-201ENST00000364578 129 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 RNU6-901P-201ENST00000384593 106 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AC008628.2-201ENST00000502605 298 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AC090517.1-201ENST00000569307 266 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AC069545.1-201ENST00000605671 358 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AL590491.3-201ENST00000610731 82 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.61□□□□□ -2.51
PRKDCP78527 RNU6-47P-201ENST00000383866 107 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.61□□□□□ -2.51
PRKDCP78527 AC253576.2-201ENST00000618815 580 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 U6.73-201ENST00000619194 103 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AC098679.4-201ENST00000624241 654 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.61□□□□□ -2.51
PRKDCP78527 HSFY7P-201ENST00000432672 318 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms