Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR548O-201ENST00000408583 114 ntBASIC3.94□□□□□ -1.78
USP46P62068 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.94□□□□□ -1.78
USP46P62068 AC021205.2-201ENST00000480069 347 ntBASIC3.94□□□□□ -1.78
USP46P62068 RNU6-830P-201ENST00000516353 107 ntBASIC3.94□□□□□ -1.78
USP46P62068 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
USP46P62068 RNU6-341P-201ENST00000516973 96 ntBASIC3.94□□□□□ -1.78
USP46P62068 AC068339.1-201ENST00000526965 141 ntBASIC3.94□□□□□ -1.78
USP46P62068 AC141557.1-201ENST00000540982 400 ntBASIC3.94□□□□□ -1.78
USP46P62068 MIR5009-201ENST00000578736 100 ntBASIC3.94□□□□□ -1.78
USP46P62068 AC021443.1-201ENST00000604478 211 ntBASIC3.94□□□□□ -1.78
USP46P62068 SNORA51-201ENST00000606420 132 ntBASIC3.94□□□□□ -1.78
USP46P62068 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.94□□□□□ -1.78
USP46P62068 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
USP46P62068 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP46P62068 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
USP46P62068 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
USP46P62068 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
USP46P62068 MAPK10-373ENST00000641983 6772 ntBASIC3.93□□□□□ -1.78
USP46P62068 Y_RNA.220-201ENST00000364244 109 ntBASIC3.93□□□□□ -1.78
USP46P62068 RNU6-1189P-201ENST00000383958 107 ntBASIC3.93□□□□□ -1.78
USP46P62068 RNY1P7-201ENST00000384743 110 ntBASIC3.93□□□□□ -1.78
USP46P62068 U8.17-201ENST00000391292 132 ntBASIC3.93□□□□□ -1.78
USP46P62068 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.93□□□□□ -1.78
USP46P62068 SNORA19.1-201ENST00000410656 129 ntBASIC3.93□□□□□ -1.78
USP46P62068 AC093578.1-201ENST00000415219 368 ntBASIC3.93□□□□□ -1.78
USP46P62068 CYP2C59P-201ENST00000457790 269 ntBASIC3.93□□□□□ -1.78
USP46P62068 AC004486.1-201ENST00000546846 233 ntBASIC3.93□□□□□ -1.78
USP46P62068 MIR3186-201ENST00000577404 85 ntBASIC3.93□□□□□ -1.78
USP46P62068 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
USP46P62068 AC244205.2-202ENST00000635781 342 ntBASIC3.93□□□□□ -1.78
USP46P62068 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USP46P62068 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP46P62068 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
USP46P62068 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP46P62068 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP46P62068 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
USP46P62068 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP46P62068 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.92□□□□□ -1.78
USP46P62068 MICF-203ENST00000432679 129 ntBASIC3.92□□□□□ -1.78
USP46P62068 AL049830.1-201ENST00000468034 425 ntBASIC3.92□□□□□ -1.78
USP46P62068 AC106707.2-201ENST00000484182 374 ntBASIC3.92□□□□□ -1.78
USP46P62068 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.92□□□□□ -1.78
USP46P62068 AC104619.4-201ENST00000510773 249 ntBASIC3.92□□□□□ -1.78
USP46P62068 RNU1-142P-201ENST00000516682 145 ntBASIC3.92□□□□□ -1.78
USP46P62068 SUMO2P16-201ENST00000519475 264 ntBASIC3.92□□□□□ -1.78
USP46P62068 MIR4474-201ENST00000579189 78 ntBASIC3.92□□□□□ -1.78
USP46P62068 MIR6075-201ENST00000620782 95 ntBASIC3.92□□□□□ -1.78
USP46P62068 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
USP46P62068 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.92□□□□□ -1.78
USP46P62068 AL161912.2-201ENST00000565707 3007 ntBASIC3.92□□□□□ -1.78
USP46P62068 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
USP46P62068 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
USP46P62068 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP46P62068 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
USP46P62068 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP46P62068 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP46P62068 SNORD68-201ENST00000363214 84 ntBASIC3.91□□□□□ -1.78
USP46P62068 Y_RNA.410-201ENST00000383992 113 ntBASIC3.91□□□□□ -1.78
USP46P62068 MIR449B-201ENST00000384995 97 ntBASIC3.91□□□□□ -1.78
USP46P62068 MIR522-201ENST00000385071 87 ntBASIC3.91□□□□□ -1.78
USP46P62068 RNA5SP323-201ENST00000391094 133 ntBASIC3.91□□□□□ -1.78
USP46P62068 RPS3AP1-201ENST00000413190 320 ntBASIC3.91□□□□□ -1.78
USP46P62068 FTH1P12-201ENST00000432137 551 ntBASIC3.91□□□□□ -1.78
USP46P62068 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.91□□□□□ -1.78
USP46P62068 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.91□□□□□ -1.78
USP46P62068 AC008011.1-201ENST00000545989 227 ntBASIC3.91□□□□□ -1.78
USP46P62068 MIR3922-201ENST00000585192 84 ntBASIC3.91□□□□□ -1.78
USP46P62068 AC062037.1-201ENST00000605302 128 ntBASIC3.91□□□□□ -1.78
USP46P62068 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.91□□□□□ -1.78
USP46P62068 AC009093.8-201ENST00000641769 292 ntBASIC3.91□□□□□ -1.78
USP46P62068 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP46P62068 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP46P62068 AC245060.5-201ENST00000610778 3293 ntBASIC3.9□□□□□ -1.78
USP46P62068 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP46P62068 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
USP46P62068 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP46P62068 GABRG2-229ENST00000641017 3628 ntBASIC3.9□□□□□ -1.79
USP46P62068 SNORA1B-201ENST00000362535 133 ntBASIC3.9□□□□□ -1.79
USP46P62068 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
USP46P62068 CYCSP35-201ENST00000451978 304 ntBASIC3.9□□□□□ -1.79
USP46P62068 TRBV12-2-201ENST00000489763 344 ntBASIC3.9□□□□□ -1.79
USP46P62068 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.9□□□□□ -1.79
USP46P62068 AL358944.1-201ENST00000528537 144 ntBASIC3.9□□□□□ -1.79
USP46P62068 AL442128.1-201ENST00000615151 90 ntBASIC3.9□□□□□ -1.79
USP46P62068 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.9□□□□□ -1.79
USP46P62068 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP46P62068 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP46P62068 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
USP46P62068 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP46P62068 SNORD14E-201ENST00000364009 85 ntBASIC3.89□□□□□ -1.79
USP46P62068 MT-TI-201ENST00000387365 69 ntBASIC3.89□□□□□ -1.79
USP46P62068 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
USP46P62068 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
USP46P62068 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
USP46P62068 AL357552.1-201ENST00000445254 415 ntBASIC3.89□□□□□ -1.79
USP46P62068 RNU7-25P-201ENST00000516544 62 ntBASIC3.89□□□□□ -1.79
USP46P62068 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
USP46P62068 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP46P62068 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.89□□□□□ -1.79
USP46P62068 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms