Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ICE2P2-201ENST00000483823 2787 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 Y_RNA.67-201ENST00000362870 100 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 SNORA20B-201ENST00000384220 132 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RHBDL3P58872 RPL21P1-201ENST00000399532 476 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 MRPL42P3-201ENST00000401492 326 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 HSPE1P24-201ENST00000450782 238 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 MTND3P22-201ENST00000510932 243 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 MIR4498-201ENST00000577599 66 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 MIR4285-201ENST00000581001 85 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 AL008636.1-201ENST00000625038 1018 ntBASIC2.08□□□□□ -2.08
RHBDL3P58872 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.08□□□□□ -2.08
RHBDL3P58872 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RHBDL3P58872 Y_RNA.338-201ENST00000365320 114 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 RNA5SP109-201ENST00000391010 116 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 RNU7-169P-201ENST00000459456 61 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 RNU6-507P-201ENST00000516045 100 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 RNU6-699P-201ENST00000517081 110 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 RNU7-172P-201ENST00000517125 64 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 AC027419.1-201ENST00000522976 328 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 AC023157.2-201ENST00000540596 141 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.07□□□□□ -2.08
RHBDL3P58872 VN1R91P-201ENST00000594377 169 ntBASIC2.07□□□□□ -2.08
RHBDL3P58872 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU6-1123P-201ENST00000362347 106 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 SNORA27.1-201ENST00000362604 124 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU4-42P-201ENST00000364738 142 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU1-78P-201ENST00000391248 165 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 MIR873-201ENST00000401120 77 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 AC022028.1-201ENST00000412054 408 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.06□□□□□ -2.08
RHBDL3P58872 AC097462.1-201ENST00000514125 324 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU6-408P-201ENST00000515910 100 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU6-976P-201ENST00000516086 111 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU6-1278P-201ENST00000516130 107 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 RNU7-128P-201ENST00000517247 62 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.06□□□□□ -2.08
RHBDL3P58872 AC006380.1-201ENST00000603598 186 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 Y_RNA.804-201ENST00000615262 101 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.06□□□□□ -2.08
RHBDL3P58872 U6.115-201ENST00000636045 103 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 MTND4P1-201ENST00000457501 1466 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 AC018630.2-201ENST00000534866 2403 ntBASIC2.06□□□□□ -2.08
RHBDL3P58872 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
RHBDL3P58872 Y_RNA.27-201ENST00000362540 103 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 Y_RNA.315-201ENST00000365117 102 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 RNU6-407P-201ENST00000365280 104 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 MTND4LP11-201ENST00000422184 280 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 MRPS18CP6-201ENST00000423587 223 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 AC245517.4-201ENST00000448601 281 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDL3P58872 RNA5SP20-201ENST00000515976 84 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 SNORA70.12-201ENST00000516084 153 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 Y_RNA.676-201ENST00000516393 96 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDL3P58872 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 MIR4303-201ENST00000581299 66 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 SNORA28-201ENST00000606769 126 ntBASIC2.05□□□□□ -2.08
RHBDL3P58872 RNU1-22P-201ENST00000363334 158 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 Y_RNA.463-201ENST00000384271 102 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 MRPL35P1-201ENST00000404272 572 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 AL355796.1-201ENST00000406706 323 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 RPS27P1-201ENST00000450552 247 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 AC005908.1-201ENST00000468701 347 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDL3P58872 AC073413.2-201ENST00000604332 360 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 AC022217.4-201ENST00000604389 163 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 AC005828.6-201ENST00000606610 232 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 MIR8063-201ENST00000621930 81 ntBASIC2.04□□□□□ -2.08
RHBDL3P58872 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RHBDL3P58872 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RHBDL3P58872 MIR126-201ENST00000362291 85 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 Y_RNA.39-201ENST00000362620 98 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 RNU4-62P-201ENST00000410125 130 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 RPL23AP36-201ENST00000413895 458 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 AC018865.2-201ENST00000423631 129 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.03□□□□□ -2.08
RHBDL3P58872 AC005002.2-201ENST00000438228 269 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.03□□□□□ -2.08
RHBDL3P58872 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 MIR8054-201ENST00000620877 86 ntBASIC2.03□□□□□ -2.08
RHBDL3P58872 AC006026.1-201ENST00000444025 1803 ntBASIC2.03□□□□□ -2.09
RHBDL3P58872 Y_RNA.243-201ENST00000364481 109 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 RNU1-115P-201ENST00000365329 160 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 RNU6-926P-201ENST00000384075 107 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 RNU6-376P-201ENST00000384731 106 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 SNORA67.5-201ENST00000391036 107 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 AC004965.1-201ENST00000413033 213 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 AL161935.2-201ENST00000414627 60 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 MTATP6P23-201ENST00000440153 476 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.02□□□□□ -2.09
RHBDL3P58872 RNA5SP445-201ENST00000515889 115 ntBASIC2.02□□□□□ -2.09
RHBDL3P58872 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.02□□□□□ -2.09
RHBDL3P58872 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms