Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.54□□□□□ -2.32
CLDN18P56856 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.54□□□□□ -2.32
CLDN18P56856 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.54□□□□□ -2.32
CLDN18P56856 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.54□□□□□ -2.32
CLDN18P56856 MTND1P15-201ENST00000579262 949 ntBASIC0.54□□□□□ -2.32
CLDN18P56856 AL512605.2-201ENST00000592972 256 ntBASIC0.54□□□□□ -2.32
CLDN18P56856 AC121247.2-201ENST00000604776 136 ntBASIC0.54□□□□□ -2.32
CLDN18P56856 AC004832.4-201ENST00000608952 331 ntBASIC0.54□□□□□ -2.32
CLDN18P56856 AC019193.3-201ENST00000609144 554 ntBASIC0.54□□□□□ -2.32
CLDN18P56856 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
CLDN18P56856 RNU6-1252P-201ENST00000363054 104 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 RNU6-254P-201ENST00000363377 107 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 MIR517A-201ENST00000385001 87 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 SNORD89-201ENST00000390981 114 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 Y_RNA.582-201ENST00000391023 95 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 MTND4LP16-201ENST00000440828 295 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 DAP3P1-201ENST00000441522 278 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 RNU6-1132P-201ENST00000459214 107 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.53□□□□□ -2.32
CLDN18P56856 RNU7-175P-201ENST00000515915 61 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 SNORA70.12-201ENST00000516084 153 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 AC134698.4-201ENST00000523451 826 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 ZNF519P2-201ENST00000557032 169 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 AC119751.7-201ENST00000600494 245 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 AL391903.3-201ENST00000612158 163 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.53□□□□□ -2.32
CLDN18P56856 AC068700.1-201ENST00000565862 3754 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 RNU6-1085P-201ENST00000363576 107 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 Y_RNA.167-201ENST00000363735 109 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 SNORA20B-201ENST00000384220 132 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 MIR514A2-201ENST00000385131 88 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 MIR514A3-201ENST00000385132 88 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 MIR891A-201ENST00000401237 79 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 MTCYBP4-201ENST00000401524 249 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.52□□□□□ -2.33
CLDN18P56856 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
CLDN18P56856 MTCO1P20-201ENST00000425366 358 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 ERLEC1P1-201ENST00000433806 578 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.52□□□□□ -2.33
CLDN18P56856 AC018710.1-201ENST00000506509 158 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 AC023827.1-201ENST00000569247 97 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 AC025627.3-201ENST00000582078 182 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.52□□□□□ -2.33
CLDN18P56856 MIR4760-201ENST00000585040 80 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 Z83818.1-201ENST00000603584 150 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 RNU6-89P-201ENST00000606519 100 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CLDN18P56856 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
CLDN18P56856 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CLDN18P56856 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CLDN18P56856 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 RNU6-163P-201ENST00000384396 106 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 RNU6-342P-201ENST00000384521 104 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 SNORD99-201ENST00000408612 74 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 AC092447.3-201ENST00000426027 686 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.51□□□□□ -2.33
CLDN18P56856 ELL2P3-201ENST00000457883 1602 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.51□□□□□ -2.33
CLDN18P56856 AP000870.1-201ENST00000472927 406 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 AC113410.1-201ENST00000505029 247 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 RNA5SP20-201ENST00000515976 84 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 RNU6-1278P-201ENST00000516130 107 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 Y_RNA.683-201ENST00000516508 93 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 AC023510.2-201ENST00000622162 746 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.51□□□□□ -2.33
CLDN18P56856 MIR6863-201ENST00000636112 90 ntBASIC0.51□□□□□ -2.33
CLDN18P56856 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CLDN18P56856 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 RNA5SP264-201ENST00000363115 107 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 RNU6-95P-201ENST00000384697 107 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 ZNF885P-201ENST00000420174 1098 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.5□□□□□ -2.33
CLDN18P56856 AL590632.1-201ENST00000424289 371 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.5□□□□□ -2.33
CLDN18P56856 RNU6-1116P-201ENST00000517269 99 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 AC022868.1-201ENST00000517767 391 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.5□□□□□ -2.33
CLDN18P56856 MIR4273-201ENST00000582824 84 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.5□□□□□ -2.33
CLDN18P56856 PVT1_3.1-201ENST00000620853 95 ntBASIC0.5□□□□□ -2.33
CLDN18P56856 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CLDN18P56856 MIR103A2-201ENST00000362154 78 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 RNU6-1335P-201ENST00000365426 107 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 Y_RNA.359-201ENST00000365498 102 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 RNU6-1042P-201ENST00000384204 107 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 MIR526A1-201ENST00000384897 85 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 RNU6-648P-201ENST00000410190 107 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 AC018865.2-201ENST00000423631 129 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 AC093019.1-201ENST00000443135 252 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 MTND1P11-201ENST00000456661 876 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 AC067940.1-201ENST00000458411 300 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 U7.7-201ENST00000459276 60 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 RNU6-835P-201ENST00000516974 104 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
CLDN18P56856 AL158211.1-201ENST00000566763 763 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms