Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SNORA25.1-201ENST00000362326 128 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 RNU4-80P-201ENST00000363200 141 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 RNU1-22P-201ENST00000363334 158 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SUMO3P55854 SNORA48.1-201ENST00000390879 135 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 RNA5SP467-201ENST00000391274 118 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SUMO3P55854 AC055731.1-201ENST00000474387 401 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 AC097462.1-201ENST00000514125 324 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 RNU6-191P-201ENST00000516295 94 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 RNU1-142P-201ENST00000516682 145 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 SCARNA24.2-201ENST00000516968 130 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 RNU7-172P-201ENST00000517125 64 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
SUMO3P55854 AC062037.2-201ENST00000610137 73 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.28□□□□□ -2.04
SUMO3P55854 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.27□□□□□ -2.05
SUMO3P55854 RNU6-514P-201ENST00000384208 107 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 RNU11-5P-201ENST00000391216 129 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 EBAG9P1-201ENST00000418955 543 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 RNU6-1132P-201ENST00000459214 107 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 RNA5SP320-201ENST00000516263 124 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 RNU6-1337P-201ENST00000516525 95 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 AL512605.2-201ENST00000592972 256 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 MIR6817-201ENST00000615588 66 ntBASIC2.27□□□□□ -2.05
SUMO3P55854 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SUMO3P55854 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.26□□□□□ -2.05
SUMO3P55854 RNU6-117P-201ENST00000365415 107 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 Y_RNA.368-201ENST00000365547 113 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 Y_RNA.456-201ENST00000384232 111 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 Y_RNA.562-201ENST00000384695 113 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 RNU6-1186P-201ENST00000410429 97 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 OOSP1P1-201ENST00000423265 274 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 AC108938.1-201ENST00000451204 136 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 RNU6-1278P-201ENST00000516130 107 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 SNORA27.4-201ENST00000516650 95 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 MIR3670-2-201ENST00000582974 65 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 MIR3670-1-201ENST00000584160 65 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 MIR3670-3-201ENST00000584855 65 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 MIR3670-4-201ENST00000612260 65 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SUMO3P55854 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
SUMO3P55854 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SUMO3P55854 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
SUMO3P55854 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
SUMO3P55854 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.25□□□□□ -2.05
SUMO3P55854 UBE2WP1-201ENST00000362030 340 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 Y_RNA.14-201ENST00000362415 103 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RNA5SP68-201ENST00000363885 119 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RNU6-1019P-201ENST00000364424 107 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 Y_RNA.341-201ENST00000365341 102 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 Y_RNA.401-201ENST00000383965 117 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RNA5SP323-201ENST00000391094 133 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 AL359511.1-201ENST00000402970 211 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RNU6-855P-201ENST00000410395 104 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.25□□□□□ -2.05
SUMO3P55854 AC010409.1-201ENST00000487382 476 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RPL36AP21-201ENST00000490372 323 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RNVU1-2-201ENST00000516326 135 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 RNU7-128P-201ENST00000517247 62 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 AC069114.2-201ENST00000604699 304 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 AP000942.4-201ENST00000604811 241 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 U6.108-201ENST00000637764 58 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 AL365361.1-201ENST00000566942 3481 ntBASIC2.25□□□□□ -2.05
SUMO3P55854 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SUMO3P55854 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
SUMO3P55854 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 Y_RNA.310-201ENST00000365063 113 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 SNORA8-201ENST00000384574 139 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 MIR518C-201ENST00000384822 101 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 MIR634-201ENST00000385208 97 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 RNU2-38P-201ENST00000410856 79 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.24□□□□□ -2.05
SUMO3P55854 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 RPL39P38-201ENST00000467018 153 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 RPS26P45-201ENST00000471748 340 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 AC091959.1-201ENST00000495857 238 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 RPS29P21-201ENST00000496272 170 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 AC136628.3-201ENST00000521868 290 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.24□□□□□ -2.05
SUMO3P55854 RPL21P9-201ENST00000556149 474 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 SUB1P4-201ENST00000566062 339 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 MIR5094-201ENST00000578766 85 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 AC012433.1-201ENST00000588916 398 ntBASIC2.24□□□□□ -2.05
SUMO3P55854 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SUMO3P55854 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SUMO3P55854 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
SUMO3P55854 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SUMO3P55854 Y_RNA.44-201ENST00000362676 108 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 SNORA33-201ENST00000363664 130 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 Y_RNA.350-201ENST00000365409 98 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 Y_RNA.352-201ENST00000365439 102 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 AL163195.1-201ENST00000496941 348 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 RNA5SP148-201ENST00000516527 94 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms