Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC011406.1-201ENST00000512440 370 ntBASIC2.05□□□□□ -2.08
CDH12P55289 RNU6-191P-201ENST00000516295 94 ntBASIC2.05□□□□□ -2.08
CDH12P55289 RNA5SP137-201ENST00000516833 135 ntBASIC2.05□□□□□ -2.08
CDH12P55289 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
CDH12P55289 MIR3169-201ENST00000578032 83 ntBASIC2.05□□□□□ -2.08
CDH12P55289 MIR3128-201ENST00000581957 66 ntBASIC2.05□□□□□ -2.08
CDH12P55289 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDH12P55289 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH12P55289 AL136360.1-201ENST00000503377 1900 ntBASIC2.05□□□□□ -2.08
CDH12P55289 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CDH12P55289 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CDH12P55289 RNU6-1266P-201ENST00000362794 105 ntBASIC2.04□□□□□ -2.08
CDH12P55289 SNORA67.4-201ENST00000384688 142 ntBASIC2.04□□□□□ -2.08
CDH12P55289 MT-TG-201ENST00000387429 68 ntBASIC2.04□□□□□ -2.08
CDH12P55289 MIR873-201ENST00000401120 77 ntBASIC2.04□□□□□ -2.08
CDH12P55289 AL603910.2-201ENST00000407268 136 ntBASIC2.04□□□□□ -2.08
CDH12P55289 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
CDH12P55289 RNU2-61P-201ENST00000411069 191 ntBASIC2.04□□□□□ -2.08
CDH12P55289 BX510359.4-201ENST00000423750 193 ntBASIC2.04□□□□□ -2.08
CDH12P55289 AL135790.2-201ENST00000437701 267 ntBASIC2.04□□□□□ -2.08
CDH12P55289 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.04□□□□□ -2.08
CDH12P55289 AC245102.2-201ENST00000448956 180 ntBASIC2.04□□□□□ -2.08
CDH12P55289 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
CDH12P55289 AC091959.1-201ENST00000495857 238 ntBASIC2.04□□□□□ -2.08
CDH12P55289 RNU6-1041P-201ENST00000516254 102 ntBASIC2.04□□□□□ -2.08
CDH12P55289 RNU6-1271P-201ENST00000517049 105 ntBASIC2.04□□□□□ -2.08
CDH12P55289 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH12P55289 MIR3162-201ENST00000581818 82 ntBASIC2.04□□□□□ -2.08
CDH12P55289 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH12P55289 U2.14-201ENST00000615943 113 ntBASIC2.04□□□□□ -2.08
CDH12P55289 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDH12P55289 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.03□□□□□ -2.08
CDH12P55289 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CDH12P55289 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDH12P55289 SNORA25.1-201ENST00000362326 128 ntBASIC2.03□□□□□ -2.08
CDH12P55289 RNA5SP289-201ENST00000362332 137 ntBASIC2.03□□□□□ -2.08
CDH12P55289 Y_RNA.60-201ENST00000362831 98 ntBASIC2.03□□□□□ -2.08
CDH12P55289 SNORA3A-201ENST00000364113 130 ntBASIC2.03□□□□□ -2.08
CDH12P55289 Y_RNA.287-201ENST00000364853 94 ntBASIC2.03□□□□□ -2.08
CDH12P55289 HMGN2P34-201ENST00000437647 269 ntBASIC2.03□□□□□ -2.08
CDH12P55289 AL353689.1-201ENST00000438895 199 ntBASIC2.03□□□□□ -2.08
CDH12P55289 SUMO1P2-201ENST00000452524 304 ntBASIC2.03□□□□□ -2.08
CDH12P55289 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH12P55289 MTND4LP30-201ENST00000454092 297 ntBASIC2.03□□□□□ -2.08
CDH12P55289 AL139109.1-201ENST00000455491 297 ntBASIC2.03□□□□□ -2.08
CDH12P55289 AL049873.1-201ENST00000480540 376 ntBASIC2.03□□□□□ -2.08
CDH12P55289 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
CDH12P55289 Y_RNA.673-201ENST00000516306 88 ntBASIC2.03□□□□□ -2.08
CDH12P55289 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
CDH12P55289 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.03□□□□□ -2.08
CDH12P55289 AC037487.3-201ENST00000606668 112 ntBASIC2.03□□□□□ -2.08
CDH12P55289 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH12P55289 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
CDH12P55289 AC022513.1-201ENST00000624512 117 ntBASIC2.03□□□□□ -2.08
CDH12P55289 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDH12P55289 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH12P55289 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDH12P55289 SNORD114-7-201ENST00000362520 77 ntBASIC2.02□□□□□ -2.09
CDH12P55289 Y_RNA.172-201ENST00000363765 102 ntBASIC2.02□□□□□ -2.09
CDH12P55289 RNU6-407P-201ENST00000365280 104 ntBASIC2.02□□□□□ -2.09
CDH12P55289 Y_RNA.352-201ENST00000365439 102 ntBASIC2.02□□□□□ -2.09
CDH12P55289 Y_RNA.416-201ENST00000384014 113 ntBASIC2.02□□□□□ -2.09
CDH12P55289 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
CDH12P55289 AL117342.1-201ENST00000404861 406 ntBASIC2.02□□□□□ -2.09
CDH12P55289 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.02□□□□□ -2.09
CDH12P55289 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
CDH12P55289 SUMO2P18-201ENST00000518873 252 ntBASIC2.02□□□□□ -2.09
CDH12P55289 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH12P55289 MIR4643-201ENST00000577473 78 ntBASIC2.02□□□□□ -2.09
CDH12P55289 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
CDH12P55289 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
CDH12P55289 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH12P55289 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CDH12P55289 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH12P55289 RNU1-58P-201ENST00000362413 163 ntBASIC2.01□□□□□ -2.09
CDH12P55289 Y_RNA.44-201ENST00000362676 108 ntBASIC2.01□□□□□ -2.09
CDH12P55289 snoU2-30.2-201ENST00000362805 70 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNU6-23P-201ENST00000363283 107 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNU6-379P-201ENST00000363813 104 ntBASIC2.01□□□□□ -2.09
CDH12P55289 SNORD27-201ENST00000363981 72 ntBASIC2.01□□□□□ -2.09
CDH12P55289 Y_RNA.277-201ENST00000364754 102 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNU6-514P-201ENST00000384208 107 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNU6-662P-201ENST00000384253 104 ntBASIC2.01□□□□□ -2.09
CDH12P55289 Y_RNA.539-201ENST00000384635 107 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNU6-417P-201ENST00000384712 107 ntBASIC2.01□□□□□ -2.09
CDH12P55289 MIR29C-201ENST00000385231 88 ntBASIC2.01□□□□□ -2.09
CDH12P55289 HMGN2P39-201ENST00000398005 273 ntBASIC2.01□□□□□ -2.09
CDH12P55289 MIR1283-2-201ENST00000408621 87 ntBASIC2.01□□□□□ -2.09
CDH12P55289 MIR548H3-201ENST00000408771 118 ntBASIC2.01□□□□□ -2.09
CDH12P55289 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH12P55289 RPS26P55-201ENST00000471178 356 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNA5SP20-201ENST00000515976 84 ntBASIC2.01□□□□□ -2.09
CDH12P55289 RNU6-1023P-201ENST00000516137 106 ntBASIC2.01□□□□□ -2.09
CDH12P55289 SNORA27.4-201ENST00000516650 95 ntBASIC2.01□□□□□ -2.09
CDH12P55289 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH12P55289 AC006435.5-201ENST00000624486 112 ntBASIC2.01□□□□□ -2.09
CDH12P55289 MIR338-201ENST00000636369 67 ntBASIC2.01□□□□□ -2.09
CDH12P55289 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
CDH12P55289 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms