Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 AC008749.1-201ENST00000597650 306 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 AC008737.2-201ENST00000599446 118 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 AL355297.3-201ENST00000604082 446 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.15-201ENST00000611544 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.16-201ENST00000613119 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.12-201ENST00000613778 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.20-201ENST00000613956 192 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.9-201ENST00000615427 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.11-201ENST00000616345 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.2-201ENST00000616535 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.3-201ENST00000617785 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.19-201ENST00000618602 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 RNU2-1-201ENST00000618664 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.6-201ENST00000619225 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.5-201ENST00000619465 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 U2.10-201ENST00000620268 191 ntBASIC2.06□□□□□ -2.08
NR1H2P55055 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
NR1H2P55055 RNU6-454P-201ENST00000364292 107 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 RNU6-937P-201ENST00000384325 106 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 RNU6-738P-201ENST00000384531 106 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 AC016909.1-201ENST00000415916 166 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 RPS15AP28-201ENST00000435088 386 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 AC018634.1-201ENST00000437554 401 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 AL118496.2-201ENST00000448300 230 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 AC026436.1-201ENST00000510537 270 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 Y_RNA.720-201ENST00000517166 92 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 AC024995.1-201ENST00000523014 93 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.05□□□□□ -2.08
NR1H2P55055 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
NR1H2P55055 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 AC022513.1-201ENST00000624512 117 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 MIR338-201ENST00000636369 67 ntBASIC2.05□□□□□ -2.08
NR1H2P55055 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NR1H2P55055 Y_RNA.101-201ENST00000363154 102 ntBASIC2.04□□□□□ -2.08
NR1H2P55055 Y_RNA.145-201ENST00000363527 102 ntBASIC2.04□□□□□ -2.08
NR1H2P55055 Y_RNA.152-201ENST00000363578 100 ntBASIC2.04□□□□□ -2.08
NR1H2P55055 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
NR1H2P55055 RNU6-327P-201ENST00000516270 127 ntBASIC2.04□□□□□ -2.08
NR1H2P55055 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
NR1H2P55055 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.04□□□□□ -2.08
NR1H2P55055 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NR1H2P55055 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NR1H2P55055 AC010615.1-201ENST00000594254 1764 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 Y_RNA.183-201ENST00000363882 113 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 Y_RNA.230-201ENST00000364348 109 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 RNU6-1175P-201ENST00000365200 107 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 Y_RNA.462-201ENST00000384268 102 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 AL117342.1-201ENST00000404861 406 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 RNU5A-5P-201ENST00000411054 116 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 ELOCP20-201ENST00000422460 345 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 MTND2P23-201ENST00000422990 651 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 FTH1P12-201ENST00000432137 551 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 HMGN2P34-201ENST00000437647 269 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 AC073910.1-201ENST00000445047 438 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.03□□□□□ -2.08
NR1H2P55055 snoU13.23-201ENST00000458863 104 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 AC010655.3-201ENST00000478818 450 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.03□□□□□ -2.08
NR1H2P55055 MRPS35P2-201ENST00000508242 191 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 RNY3P15-201ENST00000516297 97 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 SNORA40.15-201ENST00000516884 107 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 AC136932.1-201ENST00000574771 208 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 MIR5007-201ENST00000583098 95 ntBASIC2.03□□□□□ -2.08
NR1H2P55055 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NR1H2P55055 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
NR1H2P55055 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
NR1H2P55055 Y_RNA.214-201ENST00000364201 112 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 Y_RNA.459-201ENST00000384251 102 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 Y_RNA.570-201ENST00000384750 101 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 RNU2-7P-201ENST00000410794 178 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.02□□□□□ -2.09
NR1H2P55055 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
NR1H2P55055 SNORD65B-201ENST00000459126 73 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 MTATP8P1-201ENST00000467115 207 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 RPL23AP42-201ENST00000471152 471 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 AC027419.1-201ENST00000522976 328 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 MIR4423-201ENST00000580922 80 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 AC006435.5-201ENST00000624486 112 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
NR1H2P55055 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
NR1H2P55055 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NR1H2P55055 RNU6-112P-201ENST00000363599 104 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 SNORD63-201ENST00000384262 68 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 RNU11-5P-201ENST00000391216 129 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms