Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNU6-461P-201ENST00000364195 107 ntBASIC3.07□□□□□ -1.92
PMS1P54277 RNU6-383P-201ENST00000410864 94 ntBASIC3.07□□□□□ -1.92
PMS1P54277 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.07□□□□□ -1.92
PMS1P54277 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.07□□□□□ -1.92
PMS1P54277 MTCO1P44-201ENST00000441935 243 ntBASIC3.07□□□□□ -1.92
PMS1P54277 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.07□□□□□ -1.92
PMS1P54277 AC093259.1-201ENST00000509755 300 ntBASIC3.07□□□□□ -1.92
PMS1P54277 SCARNA8-201ENST00000515924 131 ntBASIC3.07□□□□□ -1.92
PMS1P54277 SNORA74D-201ENST00000516404 141 ntBASIC3.07□□□□□ -1.92
PMS1P54277 SCARNA13-201ENST00000516672 275 ntBASIC3.07□□□□□ -1.92
PMS1P54277 AC109810.1-201ENST00000534066 224 ntBASIC3.07□□□□□ -1.92
PMS1P54277 AC127455.1-201ENST00000565496 145 ntBASIC3.07□□□□□ -1.92
PMS1P54277 MIR4431-201ENST00000579990 94 ntBASIC3.07□□□□□ -1.92
PMS1P54277 AP001485.1-201ENST00000604799 199 ntBASIC3.07□□□□□ -1.92
PMS1P54277 AL391903.3-201ENST00000612158 163 ntBASIC3.07□□□□□ -1.92
PMS1P54277 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PMS1P54277 AC108206.1-201ENST00000570186 4159 ntBASIC3.06□□□□□ -1.92
PMS1P54277 Y_RNA.229-201ENST00000364347 113 ntBASIC3.06□□□□□ -1.92
PMS1P54277 SNORD50.2-201ENST00000365465 70 ntBASIC3.06□□□□□ -1.92
PMS1P54277 RNU6-239P-201ENST00000390990 99 ntBASIC3.06□□□□□ -1.92
PMS1P54277 RN7SKP123-201ENST00000410732 291 ntBASIC3.06□□□□□ -1.92
PMS1P54277 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
PMS1P54277 AL135786.1-201ENST00000415892 214 ntBASIC3.06□□□□□ -1.92
PMS1P54277 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.06□□□□□ -1.92
PMS1P54277 AC092427.1-202ENST00000430569 476 ntBASIC3.06□□□□□ -1.92
PMS1P54277 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.06□□□□□ -1.92
PMS1P54277 RN7SL297P-201ENST00000483161 293 ntBASIC3.06□□□□□ -1.92
PMS1P54277 RPL23AP54-201ENST00000495129 419 ntBASIC3.06□□□□□ -1.92
PMS1P54277 CENPCP1-201ENST00000533085 2578 ntBASIC3.06□□□□□ -1.92
PMS1P54277 AC079600.2-201ENST00000550076 130 ntBASIC3.06□□□□□ -1.92
PMS1P54277 MIR3616-201ENST00000584070 92 ntBASIC3.06□□□□□ -1.92
PMS1P54277 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.06□□□□□ -1.92
PMS1P54277 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
PMS1P54277 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
PMS1P54277 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
PMS1P54277 SNORD46.1-201ENST00000364139 104 ntBASIC3.05□□□□□ -1.92
PMS1P54277 Y_RNA.332-201ENST00000365271 113 ntBASIC3.05□□□□□ -1.92
PMS1P54277 MIR1253-201ENST00000408273 105 ntBASIC3.05□□□□□ -1.92
PMS1P54277 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
PMS1P54277 AC022018.1-201ENST00000430685 241 ntBASIC3.05□□□□□ -1.92
PMS1P54277 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.05□□□□□ -1.92
PMS1P54277 AC025750.2-201ENST00000442609 450 ntBASIC3.05□□□□□ -1.92
PMS1P54277 AL121914.1-201ENST00000450188 156 ntBASIC3.05□□□□□ -1.92
PMS1P54277 EEF1B2P7-201ENST00000451177 676 ntBASIC3.05□□□□□ -1.92
PMS1P54277 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
PMS1P54277 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.05□□□□□ -1.92
PMS1P54277 MIR3117-201ENST00000584034 78 ntBASIC3.05□□□□□ -1.92
PMS1P54277 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
PMS1P54277 ZNF861P-201ENST00000588126 639 ntBASIC3.05□□□□□ -1.92
PMS1P54277 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PMS1P54277 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PMS1P54277 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.04□□□□□ -1.92
PMS1P54277 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.04□□□□□ -1.92
PMS1P54277 Y_RNA.400-201ENST00000383963 111 ntBASIC3.04□□□□□ -1.92
PMS1P54277 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
PMS1P54277 SNORA44-201ENST00000384584 132 ntBASIC3.04□□□□□ -1.92
PMS1P54277 MT-TT-201ENST00000387460 66 ntBASIC3.04□□□□□ -1.92
PMS1P54277 SNORD88.1-201ENST00000408684 91 ntBASIC3.04□□□□□ -1.92
PMS1P54277 RNA5SP511-201ENST00000410487 115 ntBASIC3.04□□□□□ -1.92
PMS1P54277 RNU2-48P-201ENST00000410694 191 ntBASIC3.04□□□□□ -1.92
PMS1P54277 AC003685.2-201ENST00000422795 395 ntBASIC3.04□□□□□ -1.92
PMS1P54277 AL606753.1-201ENST00000427435 87 ntBASIC3.04□□□□□ -1.92
PMS1P54277 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.04□□□□□ -1.92
PMS1P54277 AC107027.2-201ENST00000512197 115 ntBASIC3.04□□□□□ -1.92
PMS1P54277 RNU6-667P-201ENST00000517186 102 ntBASIC3.04□□□□□ -1.92
PMS1P54277 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS1P54277 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS1P54277 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
PMS1P54277 MIR3944-201ENST00000581277 108 ntBASIC3.04□□□□□ -1.92
PMS1P54277 MIR4325-201ENST00000583049 90 ntBASIC3.04□□□□□ -1.92
PMS1P54277 MIR3605-201ENST00000583214 100 ntBASIC3.04□□□□□ -1.92
PMS1P54277 MIR5195-201ENST00000583555 115 ntBASIC3.04□□□□□ -1.92
PMS1P54277 MIR4438-201ENST00000585271 93 ntBASIC3.04□□□□□ -1.92
PMS1P54277 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.04□□□□□ -1.92
PMS1P54277 AL162274.2-201ENST00000614406 332 ntBASIC3.04□□□□□ -1.92
PMS1P54277 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.03□□□□□ -1.92
PMS1P54277 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PMS1P54277 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PMS1P54277 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.03□□□□□ -1.92
PMS1P54277 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PMS1P54277 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PMS1P54277 RNU6-151P-201ENST00000364158 107 ntBASIC3.03□□□□□ -1.92
PMS1P54277 RNU1-112P-201ENST00000364401 164 ntBASIC3.03□□□□□ -1.92
PMS1P54277 Y_RNA.343-201ENST00000365354 112 ntBASIC3.03□□□□□ -1.92
PMS1P54277 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PMS1P54277 Y_RNA.488-201ENST00000384403 102 ntBASIC3.03□□□□□ -1.92
PMS1P54277 RNU6-1228P-201ENST00000391014 107 ntBASIC3.03□□□□□ -1.92
PMS1P54277 AL606845.1-201ENST00000404881 255 ntBASIC3.03□□□□□ -1.92
PMS1P54277 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.03□□□□□ -1.92
PMS1P54277 RNU6-437P-201ENST00000459408 95 ntBASIC3.03□□□□□ -1.92
PMS1P54277 S100A11P2-201ENST00000467589 312 ntBASIC3.03□□□□□ -1.92
PMS1P54277 SNORA9.3-201ENST00000516383 129 ntBASIC3.03□□□□□ -1.92
PMS1P54277 RNU6-856P-201ENST00000516959 98 ntBASIC3.03□□□□□ -1.92
PMS1P54277 AC015720.1-201ENST00000565251 277 ntBASIC3.03□□□□□ -1.92
PMS1P54277 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.03□□□□□ -1.92
PMS1P54277 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.03□□□□□ -1.92
PMS1P54277 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.03□□□□□ -1.92
PMS1P54277 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PMS1P54277 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PMS1P54277 RNA5SP125-201ENST00000364843 120 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms