Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 COX6CP10-201ENST00000416832 224 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.67□□□□□ -2.14
LIMK1P53667 TOMM22P2-201ENST00000430735 237 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.67□□□□□ -2.14
LIMK1P53667 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.67□□□□□ -2.14
LIMK1P53667 AC105758.1-201ENST00000506038 399 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 RNU6-507P-201ENST00000516045 100 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 Y_RNA.702-201ENST00000516843 96 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 RNU7-4P-201ENST00000516961 62 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.67□□□□□ -2.14
LIMK1P53667 AL355375.2-201ENST00000574825 175 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 AL132765.2-201ENST00000610812 351 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.67□□□□□ -2.14
LIMK1P53667 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.67□□□□□ -2.14
LIMK1P53667 SNORA33-201ENST00000363664 130 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
LIMK1P53667 MIR1267-201ENST00000408723 78 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 FTH1P12-201ENST00000432137 551 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 RPS4XP11-201ENST00000446897 772 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 RNU1-98P-201ENST00000458992 160 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 HMGN1P7-201ENST00000491722 313 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 AL163195.1-201ENST00000496941 348 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 AC074133.1-201ENST00000515696 183 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 RNU6-277P-201ENST00000516272 106 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 RN7SKP49-201ENST00000516675 260 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 RNA5SP102-201ENST00000516865 106 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 MIR2355-201ENST00000517199 87 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 AC024995.1-201ENST00000523014 93 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 AC073544.1-201ENST00000600110 1595 ntBASIC1.66□□□□□ -2.14
LIMK1P53667 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIMK1P53667 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 MTND4P28-201ENST00000426217 387 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.65□□□□□ -2.15
LIMK1P53667 RNU6-625P-201ENST00000459412 107 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 RPS27P22-201ENST00000478056 241 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.65□□□□□ -2.15
LIMK1P53667 AC018448.1-201ENST00000552843 316 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 AC080078.3-201ENST00000605407 463 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 MIR6734-201ENST00000621166 68 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.65□□□□□ -2.15
LIMK1P53667 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMK1P53667 RNU6-490P-201ENST00000362985 107 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 SNORA16.1-201ENST00000364597 132 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 RNU6-1264P-201ENST00000383891 107 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 Y_RNA.529-201ENST00000384586 119 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 RNY4P36-201ENST00000391116 96 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 SNORD12B-201ENST00000410433 91 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMK1P53667 AC236972.2-201ENST00000434979 310 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 SNORD65B-201ENST00000459126 73 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 Y_RNA.718-201ENST00000517110 102 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 AC022432.1-201ENST00000595739 310 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 AL357075.2-201ENST00000614906 189 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMK1P53667 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LIMK1P53667 AC100821.1-201ENST00000523153 2479 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 AL161722.3-201ENST00000605789 2983 ntBASIC1.64□□□□□ -2.15
LIMK1P53667 RNY3P11-201ENST00000364153 102 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 SNORA63D-201ENST00000364359 132 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 RNU6-926P-201ENST00000384075 107 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 MIR628-201ENST00000385229 95 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 Y_RNA.592-201ENST00000410274 109 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 ELOCP21-201ENST00000412558 336 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.63□□□□□ -2.15
LIMK1P53667 Y_RNA.632-201ENST00000459189 102 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AC010469.2-201ENST00000496412 480 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AC010598.1-201ENST00000510378 103 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 SNORA40.9-201ENST00000515895 93 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AC023157.2-201ENST00000540596 141 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AP001094.1-201ENST00000579805 193 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AL645939.4-201ENST00000604495 135 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 Y_RNA.804-201ENST00000615262 101 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 AC087588.2-201ENST00000617667 426 ntBASIC1.63□□□□□ -2.15
LIMK1P53667 RNU6-1301P-201ENST00000362724 104 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 Y_RNA.70-201ENST00000362886 110 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 Y_RNA.263-201ENST00000364659 114 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 RNU6-318P-201ENST00000384283 103 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.62□□□□□ -2.15
LIMK1P53667 AC099799.1-201ENST00000439809 192 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 ELOCP24-201ENST00000456370 334 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 RNU7-34P-201ENST00000459394 64 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMK1P53667 MIR4709-201ENST00000577272 72 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.62□□□□□ -2.15
LIMK1P53667 MIR4438-201ENST00000585271 93 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 AC136443.5-201ENST00000603741 370 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
LIMK1P53667 AC006026.1-201ENST00000444025 1803 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
LIMK1P53667 Y_RNA.146-201ENST00000363549 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms