Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR4524B-201ENST00000581569 115 ntBASIC2.4□□□□□ -2.03
COPB1P53618 DEFB117-201ENST00000602356 141 ntBASIC2.4□□□□□ -2.03
COPB1P53618 AC006380.1-201ENST00000603598 186 ntBASIC2.4□□□□□ -2.03
COPB1P53618 AC009779.6-201ENST00000603972 165 ntBASIC2.4□□□□□ -2.03
COPB1P53618 AL355297.2-201ENST00000604792 129 ntBASIC2.4□□□□□ -2.03
COPB1P53618 AC037487.3-201ENST00000606668 112 ntBASIC2.4□□□□□ -2.03
COPB1P53618 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
COPB1P53618 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.4□□□□□ -2.03
COPB1P53618 U6.115-201ENST00000636045 103 ntBASIC2.4□□□□□ -2.03
COPB1P53618 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
COPB1P53618 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.4□□□□□ -2.03
COPB1P53618 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.39□□□□□ -2.03
COPB1P53618 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
COPB1P53618 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COPB1P53618 SNORA25.1-201ENST00000362326 128 ntBASIC2.39□□□□□ -2.03
COPB1P53618 Y_RNA.76-201ENST00000362931 109 ntBASIC2.39□□□□□ -2.03
COPB1P53618 RNU4-80P-201ENST00000363200 141 ntBASIC2.39□□□□□ -2.03
COPB1P53618 MIR561-201ENST00000385216 97 ntBASIC2.39□□□□□ -2.03
COPB1P53618 SNORA3.2-201ENST00000408221 125 ntBASIC2.39□□□□□ -2.03
COPB1P53618 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
COPB1P53618 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
COPB1P53618 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
COPB1P53618 RNU1-41P-201ENST00000516161 162 ntBASIC2.39□□□□□ -2.03
COPB1P53618 RNU1-48P-201ENST00000516400 162 ntBASIC2.39□□□□□ -2.03
COPB1P53618 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.39□□□□□ -2.03
COPB1P53618 MIR4753-201ENST00000585119 83 ntBASIC2.39□□□□□ -2.03
COPB1P53618 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.39□□□□□ -2.03
COPB1P53618 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COPB1P53618 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.39□□□□□ -2.03
COPB1P53618 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
COPB1P53618 MIR340-201ENST00000362125 95 ntBASIC2.38□□□□□ -2.03
COPB1P53618 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
COPB1P53618 Y_RNA.65-201ENST00000362846 100 ntBASIC2.38□□□□□ -2.03
COPB1P53618 Y_RNA.217-201ENST00000364214 105 ntBASIC2.38□□□□□ -2.03
COPB1P53618 Y_RNA.332-201ENST00000365271 113 ntBASIC2.38□□□□□ -2.03
COPB1P53618 AL031003.1-201ENST00000404229 172 ntBASIC2.38□□□□□ -2.03
COPB1P53618 RNU6-651P-201ENST00000411040 105 ntBASIC2.38□□□□□ -2.03
COPB1P53618 MTCO1P44-201ENST00000441935 243 ntBASIC2.38□□□□□ -2.03
COPB1P53618 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.38□□□□□ -2.03
COPB1P53618 AC016717.1-201ENST00000448918 286 ntBASIC2.38□□□□□ -2.03
COPB1P53618 Y_RNA.641-201ENST00000459414 105 ntBASIC2.38□□□□□ -2.03
COPB1P53618 RNU6-221P-201ENST00000459541 99 ntBASIC2.38□□□□□ -2.03
COPB1P53618 AC093259.1-201ENST00000509755 300 ntBASIC2.38□□□□□ -2.03
COPB1P53618 RNU4-71P-201ENST00000516258 113 ntBASIC2.38□□□□□ -2.03
COPB1P53618 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
COPB1P53618 MIR4282-201ENST00000583613 67 ntBASIC2.38□□□□□ -2.03
COPB1P53618 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.38□□□□□ -2.03
COPB1P53618 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
COPB1P53618 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
COPB1P53618 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COPB1P53618 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COPB1P53618 Y_RNA.122-201ENST00000363331 96 ntBASIC2.37□□□□□ -2.03
COPB1P53618 RNU6-418P-201ENST00000384035 107 ntBASIC2.37□□□□□ -2.03
COPB1P53618 Y_RNA.515-201ENST00000384535 112 ntBASIC2.37□□□□□ -2.03
COPB1P53618 AL356320.1-201ENST00000429616 163 ntBASIC2.37□□□□□ -2.03
COPB1P53618 AC114982.1-201ENST00000469402 321 ntBASIC2.37□□□□□ -2.03
COPB1P53618 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.37□□□□□ -2.03
COPB1P53618 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.37□□□□□ -2.03
COPB1P53618 HMGB3P3-201ENST00000510526 400 ntBASIC2.37□□□□□ -2.03
COPB1P53618 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.37□□□□□ -2.03
COPB1P53618 RNA5SP200-201ENST00000516360 103 ntBASIC2.37□□□□□ -2.03
COPB1P53618 RNA5SP490-201ENST00000517141 136 ntBASIC2.37□□□□□ -2.03
COPB1P53618 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.37□□□□□ -2.03
COPB1P53618 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
COPB1P53618 AL162424.1-201ENST00000602325 221 ntBASIC2.37□□□□□ -2.03
COPB1P53618 AC011921.3-201ENST00000605540 361 ntBASIC2.37□□□□□ -2.03
COPB1P53618 snoZ196.1-201ENST00000625269 89 ntBASIC2.37□□□□□ -2.03
COPB1P53618 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.37□□□□□ -2.03
COPB1P53618 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
COPB1P53618 AC009487.4-201ENST00000624969 3585 ntBASIC2.37□□□□□ -2.03
COPB1P53618 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
COPB1P53618 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COPB1P53618 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.82-201ENST00000363000 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.92-201ENST00000363043 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.117-201ENST00000363294 101 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.235-201ENST00000364412 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 RNU6-200P-201ENST00000364743 107 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.306-201ENST00000365015 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.312-201ENST00000365089 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.322-201ENST00000365151 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 SNORA25B-201ENST00000365507 128 ntBASIC2.36□□□□□ -2.03
COPB1P53618 RNU6-514P-201ENST00000384208 107 ntBASIC2.36□□□□□ -2.03
COPB1P53618 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
COPB1P53618 MT-TR-201ENST00000387439 65 ntBASIC2.36□□□□□ -2.03
COPB1P53618 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
COPB1P53618 AL357139.1-201ENST00000407792 426 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
COPB1P53618 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.36□□□□□ -2.03
COPB1P53618 RPL23AP7-203ENST00000449021 469 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.650-201ENST00000459002 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 AC010531.2-201ENST00000465012 153 ntBASIC2.36□□□□□ -2.03
COPB1P53618 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
COPB1P53618 RNU6-948P-201ENST00000516374 107 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.777-201ENST00000516982 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 AC130289.1-201ENST00000577321 73 ntBASIC2.36□□□□□ -2.03
COPB1P53618 MIR3684-201ENST00000579779 74 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.771-201ENST00000598668 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.36□□□□□ -2.03
COPB1P53618 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms