Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNU6-320P-201ENST00000516511 106 ntBASIC-0.51□□□□□ -2.49
POLR2JP52435 AC133485.4-201ENST00000561835 220 ntBASIC-0.51□□□□□ -2.49
POLR2JP52435 AC099654.13-201ENST00000639774 207 ntBASIC-0.51□□□□□ -2.49
POLR2JP52435 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
POLR2JP52435 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.52□□□□□ -2.49
POLR2JP52435 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 MIR489-201ENST00000384923 84 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 MIR15B-201ENST00000385045 98 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 MT-TN-201ENST00000387400 73 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.52□□□□□ -2.49
POLR2JP52435 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.52□□□□□ -2.49
POLR2JP52435 RNU7-165P-201ENST00000458864 60 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 RNU7-159P-201ENST00000459284 62 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 AC016550.1-201ENST00000505348 785 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 RNU7-129P-201ENST00000516128 62 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.52□□□□□ -2.49
POLR2JP52435 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.52□□□□□ -2.49
POLR2JP52435 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.53□□□□□ -2.49
POLR2JP52435 SNORD68-201ENST00000363214 84 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 RNU6-187P-201ENST00000384139 106 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 RNU6-74P-201ENST00000384235 107 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 RNU6-376P-201ENST00000384731 106 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 MIR938-201ENST00000401216 83 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 MIR892B-201ENST00000401279 77 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 AL390729.2-201ENST00000416137 156 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.53□□□□□ -2.49
POLR2JP52435 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.53□□□□□ -2.49
POLR2JP52435 AC104850.1-201ENST00000435940 476 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 SCARNA18-201ENST00000459004 134 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.53□□□□□ -2.49
POLR2JP52435 RNU6-782P-201ENST00000516852 104 ntBASIC-0.53□□□□□ -2.49
POLR2JP52435 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.53□□□□□ -2.49
POLR2JP52435 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.53□□□□□ -2.49
POLR2JP52435 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 SNORA18.1-201ENST00000363418 128 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 U8.5-201ENST00000364528 136 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 SNORA20B-201ENST00000384220 132 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 MIR760-201ENST00000390220 80 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 RNU6-205P-201ENST00000390858 107 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 SNORD28B-201ENST00000390993 75 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 RNU6-269P-201ENST00000391077 97 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 MTCO2P21-201ENST00000419780 677 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 BTF3P11-201ENST00000426582 477 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AL353572.1-201ENST00000442490 417 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.54□□□□□ -2.5
POLR2JP52435 AC079354.2-201ENST00000453523 154 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC091885.1-201ENST00000506658 268 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 SNORD27.1-201ENST00000516319 72 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 RNA5SP54-201ENST00000516951 92 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 MTND1P35-201ENST00000526739 508 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC010525.2-201ENST00000590920 195 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC092447.9-201ENST00000603395 144 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 MIR7107-201ENST00000611489 80 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC091304.9-201ENST00000612091 226 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC009878.1-201ENST00000621819 340 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC010608.3-201ENST00000625048 527 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 AC013437.2-201ENST00000639587 677 ntBASIC-0.54□□□□□ -2.5
POLR2JP52435 MTND4P12-201ENST00000498999 1377 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU6-727P-201ENST00000363592 107 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU4-92P-201ENST00000363783 136 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 SNORD115-8-201ENST00000363856 82 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 SNORA1.1-201ENST00000364671 133 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 SNORD115-38-201ENST00000365037 82 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU6-157P-201ENST00000383957 107 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 MIR106A-201ENST00000384870 81 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 AC018865.2-201ENST00000423631 129 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU6-848P-201ENST00000515948 107 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU6-617P-201ENST00000516147 107 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU6-473P-201ENST00000516164 107 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.55□□□□□ -2.5
POLR2JP52435 MIR4703-201ENST00000577728 79 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 MIR4762-201ENST00000585261 75 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU4-5P-201ENST00000607255 135 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 AF250324.2-201ENST00000608299 610 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 AL607023.1-201ENST00000620045 248 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 MIR499B-201ENST00000636498 73 ntBASIC-0.55□□□□□ -2.5
POLR2JP52435 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 SNORD114-12-201ENST00000365400 75 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 SNORA26-201ENST00000391286 122 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 RNU2-54P-201ENST00000410299 190 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.56□□□□□ -2.5
POLR2JP52435 MTCO2P11-201ENST00000431069 680 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 RPS29P15-201ENST00000458329 171 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 RNU7-102P-201ENST00000458948 62 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 RPL23AP75-201ENST00000491601 451 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.56□□□□□ -2.5
POLR2JP52435 RNA5SP20-201ENST00000515976 84 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 SNORA25.14-201ENST00000516481 132 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.56□□□□□ -2.5
POLR2JP52435 MIR548AR-201ENST00000582191 57 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 SEPT14P19-203ENST00000633205 211 ntBASIC-0.56□□□□□ -2.5
POLR2JP52435 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms