Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
LIG4P49917 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
LIG4P49917 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.63□□□□□ -2.15
LIG4P49917 MTND5P20-201ENST00000448677 143 ntBASIC1.63□□□□□ -2.15
LIG4P49917 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.63□□□□□ -2.15
LIG4P49917 RNU7-169P-201ENST00000459456 61 ntBASIC1.63□□□□□ -2.15
LIG4P49917 FGF7P4-201ENST00000509595 295 ntBASIC1.63□□□□□ -2.15
LIG4P49917 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.63□□□□□ -2.15
LIG4P49917 RNU6-237P-201ENST00000515985 71 ntBASIC1.63□□□□□ -2.15
LIG4P49917 RNU6-507P-201ENST00000516045 100 ntBASIC1.63□□□□□ -2.15
LIG4P49917 Y_RNA.675-201ENST00000516389 149 ntBASIC1.63□□□□□ -2.15
LIG4P49917 MIR3684-201ENST00000579779 74 ntBASIC1.63□□□□□ -2.15
LIG4P49917 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LIG4P49917 Y_RNA.70-201ENST00000362886 110 ntBASIC1.62□□□□□ -2.15
LIG4P49917 RNY3P11-201ENST00000364153 102 ntBASIC1.62□□□□□ -2.15
LIG4P49917 RNU6-950P-201ENST00000384651 107 ntBASIC1.62□□□□□ -2.15
LIG4P49917 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
LIG4P49917 MIR559-201ENST00000385188 96 ntBASIC1.62□□□□□ -2.15
LIG4P49917 RNA5SP475-201ENST00000410568 110 ntBASIC1.62□□□□□ -2.15
LIG4P49917 Y_RNA.605-201ENST00000410577 105 ntBASIC1.62□□□□□ -2.15
LIG4P49917 AC010154.1-201ENST00000425857 269 ntBASIC1.62□□□□□ -2.15
LIG4P49917 AC245047.3-201ENST00000429428 127 ntBASIC1.62□□□□□ -2.15
LIG4P49917 Y_RNA.632-201ENST00000459189 102 ntBASIC1.62□□□□□ -2.15
LIG4P49917 Y_RNA.702-201ENST00000516843 96 ntBASIC1.62□□□□□ -2.15
LIG4P49917 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
LIG4P49917 AC084781.2-201ENST00000615568 161 ntBASIC1.62□□□□□ -2.15
LIG4P49917 MIR302D-201ENST00000362275 68 ntBASIC1.61□□□□□ -2.15
LIG4P49917 Y_RNA.67-201ENST00000362870 100 ntBASIC1.61□□□□□ -2.15
LIG4P49917 RNU6-490P-201ENST00000362985 107 ntBASIC1.61□□□□□ -2.15
LIG4P49917 Y_RNA.263-201ENST00000364659 114 ntBASIC1.61□□□□□ -2.15
LIG4P49917 Y_RNA.314-201ENST00000365114 102 ntBASIC1.61□□□□□ -2.15
LIG4P49917 Y_RNA.529-201ENST00000384586 119 ntBASIC1.61□□□□□ -2.15
LIG4P49917 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
LIG4P49917 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
LIG4P49917 MTCO3P19-201ENST00000415864 321 ntBASIC1.61□□□□□ -2.15
LIG4P49917 AC099799.1-201ENST00000439809 192 ntBASIC1.61□□□□□ -2.15
LIG4P49917 AC097462.1-201ENST00000514125 324 ntBASIC1.61□□□□□ -2.15
LIG4P49917 SNORA31.10-201ENST00000516482 106 ntBASIC1.61□□□□□ -2.15
LIG4P49917 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
LIG4P49917 MIR8054-201ENST00000620877 86 ntBASIC1.61□□□□□ -2.15
LIG4P49917 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.61□□□□□ -2.15
LIG4P49917 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIG4P49917 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU6-454P-201ENST00000364292 107 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU6-407P-201ENST00000365280 104 ntBASIC1.6□□□□□ -2.15
LIG4P49917 Y_RNA.356-201ENST00000365475 113 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU6-1040P-201ENST00000383974 107 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU6-926P-201ENST00000384075 107 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNY3P14-201ENST00000384309 102 ntBASIC1.6□□□□□ -2.15
LIG4P49917 MRPL42P3-201ENST00000401492 326 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
LIG4P49917 MTCO2P27-201ENST00000420740 428 ntBASIC1.6□□□□□ -2.15
LIG4P49917 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.6□□□□□ -2.15
LIG4P49917 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
LIG4P49917 AC099513.1-201ENST00000490423 301 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.6□□□□□ -2.15
LIG4P49917 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.6□□□□□ -2.15
LIG4P49917 RNU6-408P-201ENST00000515910 100 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU6-699P-201ENST00000517081 110 ntBASIC1.6□□□□□ -2.15
LIG4P49917 RNU7-172P-201ENST00000517125 64 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.6□□□□□ -2.15
LIG4P49917 AL442163.3-201ENST00000554110 156 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AC015688.6-201ENST00000577737 104 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AP000942.3-201ENST00000603702 160 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AC073413.2-201ENST00000604332 360 ntBASIC1.6□□□□□ -2.15
LIG4P49917 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
LIG4P49917 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.6□□□□□ -2.15
LIG4P49917 U6.115-201ENST00000636045 103 ntBASIC1.6□□□□□ -2.15
LIG4P49917 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LIG4P49917 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIG4P49917 SNORA27.1-201ENST00000362604 124 ntBASIC1.59□□□□□ -2.15
LIG4P49917 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
LIG4P49917 RNU6-1310P-201ENST00000384153 107 ntBASIC1.59□□□□□ -2.15
LIG4P49917 RNU6-1031P-201ENST00000384773 107 ntBASIC1.59□□□□□ -2.15
LIG4P49917 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
LIG4P49917 AC018865.2-201ENST00000423631 129 ntBASIC1.59□□□□□ -2.15
LIG4P49917 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
LIG4P49917 RNU7-94P-201ENST00000459576 63 ntBASIC1.59□□□□□ -2.15
LIG4P49917 RPS26P55-201ENST00000471178 356 ntBASIC1.59□□□□□ -2.15
LIG4P49917 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.59□□□□□ -2.15
LIG4P49917 RNA5SP20-201ENST00000515976 84 ntBASIC1.59□□□□□ -2.15
LIG4P49917 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
LIG4P49917 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.59□□□□□ -2.15
LIG4P49917 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
LIG4P49917 AC021506.2-201ENST00000612354 169 ntBASIC1.59□□□□□ -2.15
LIG4P49917 AC018630.2-201ENST00000534866 2403 ntBASIC1.59□□□□□ -2.16
LIG4P49917 MTND5P10-201ENST00000603719 1809 ntBASIC1.59□□□□□ -2.16
LIG4P49917 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.16
LIG4P49917 RNY3P4-201ENST00000384428 101 ntBASIC1.58□□□□□ -2.16
LIG4P49917 MIR628-201ENST00000385229 95 ntBASIC1.58□□□□□ -2.16
LIG4P49917 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
LIG4P49917 RNU6-440P-201ENST00000390882 105 ntBASIC1.58□□□□□ -2.16
LIG4P49917 RN7SKP200-201ENST00000410564 320 ntBASIC1.58□□□□□ -2.16
LIG4P49917 RNU7-152P-201ENST00000458982 64 ntBASIC1.58□□□□□ -2.16
LIG4P49917 SNORD19B-201ENST00000459623 84 ntBASIC1.58□□□□□ -2.16
LIG4P49917 RNA5SP445-201ENST00000515889 115 ntBASIC1.58□□□□□ -2.16
LIG4P49917 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.58□□□□□ -2.16
LIG4P49917 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms