Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SOX2P48431 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SOX2P48431 RNU6-1272P-201ENST00000362776 107 ntBASIC2.15□□□□□ -2.07
SOX2P48431 Y_RNA.368-201ENST00000365547 113 ntBASIC2.15□□□□□ -2.07
SOX2P48431 Y_RNA.456-201ENST00000384232 111 ntBASIC2.15□□□□□ -2.07
SOX2P48431 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
SOX2P48431 CR769767.1-201ENST00000436337 346 ntBASIC2.15□□□□□ -2.07
SOX2P48431 HMGN2P34-201ENST00000437647 269 ntBASIC2.15□□□□□ -2.07
SOX2P48431 AC011753.1-201ENST00000451001 220 ntBASIC2.15□□□□□ -2.07
SOX2P48431 HSPE1P13-201ENST00000451143 297 ntBASIC2.15□□□□□ -2.07
SOX2P48431 S100A11P2-201ENST00000467589 312 ntBASIC2.15□□□□□ -2.07
SOX2P48431 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.15□□□□□ -2.07
SOX2P48431 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.15□□□□□ -2.07
SOX2P48431 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.15□□□□□ -2.07
SOX2P48431 AC011406.1-201ENST00000512440 370 ntBASIC2.15□□□□□ -2.07
SOX2P48431 AC136628.3-201ENST00000521868 290 ntBASIC2.15□□□□□ -2.07
SOX2P48431 AL137100.2-201ENST00000555786 315 ntBASIC2.15□□□□□ -2.07
SOX2P48431 MIR4282-201ENST00000583613 67 ntBASIC2.15□□□□□ -2.07
SOX2P48431 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.15□□□□□ -2.07
SOX2P48431 MIR6895-201ENST00000613497 78 ntBASIC2.15□□□□□ -2.07
SOX2P48431 AL137790.1-201ENST00000634283 177 ntBASIC2.15□□□□□ -2.07
SOX2P48431 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.15□□□□□ -2.07
SOX2P48431 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
SOX2P48431 CENPCP1-201ENST00000533085 2578 ntBASIC2.15□□□□□ -2.07
SOX2P48431 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SOX2P48431 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
SOX2P48431 Y_RNA.76-201ENST00000362931 109 ntBASIC2.14□□□□□ -2.07
SOX2P48431 SNORD115-3-201ENST00000363100 82 ntBASIC2.14□□□□□ -2.07
SOX2P48431 RNA5SP456-201ENST00000364002 114 ntBASIC2.14□□□□□ -2.07
SOX2P48431 SNORD114-6-201ENST00000364393 72 ntBASIC2.14□□□□□ -2.07
SOX2P48431 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
SOX2P48431 RNU6-651P-201ENST00000411040 105 ntBASIC2.14□□□□□ -2.07
SOX2P48431 BTF3P11-201ENST00000426582 477 ntBASIC2.14□□□□□ -2.07
SOX2P48431 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.14□□□□□ -2.07
SOX2P48431 AL353689.1-201ENST00000438895 199 ntBASIC2.14□□□□□ -2.07
SOX2P48431 AC010409.1-201ENST00000487382 476 ntBASIC2.14□□□□□ -2.07
SOX2P48431 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.14□□□□□ -2.07
SOX2P48431 SUMO2P18-201ENST00000518873 252 ntBASIC2.14□□□□□ -2.07
SOX2P48431 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.14□□□□□ -2.07
SOX2P48431 AL442067.1-201ENST00000613261 223 ntBASIC2.14□□□□□ -2.07
SOX2P48431 AC022202.1-201ENST00000613515 211 ntBASIC2.14□□□□□ -2.07
SOX2P48431 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
SOX2P48431 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
SOX2P48431 AC073349.3-201ENST00000617616 186 ntBASIC2.14□□□□□ -2.07
SOX2P48431 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SOX2P48431 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SOX2P48431 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SOX2P48431 RNU6-859P-201ENST00000362728 107 ntBASIC2.13□□□□□ -2.07
SOX2P48431 snoU2-30.2-201ENST00000362805 70 ntBASIC2.13□□□□□ -2.07
SOX2P48431 Y_RNA.111-201ENST00000363248 100 ntBASIC2.13□□□□□ -2.07
SOX2P48431 Y_RNA.310-201ENST00000365063 113 ntBASIC2.13□□□□□ -2.07
SOX2P48431 SNORA48.2-201ENST00000390926 124 ntBASIC2.13□□□□□ -2.07
SOX2P48431 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
SOX2P48431 AL135790.2-201ENST00000437701 267 ntBASIC2.13□□□□□ -2.07
SOX2P48431 AC105272.1-201ENST00000438604 198 ntBASIC2.13□□□□□ -2.07
SOX2P48431 AL109933.2-201ENST00000452651 260 ntBASIC2.13□□□□□ -2.07
SOX2P48431 SNORD2.1-201ENST00000458762 69 ntBASIC2.13□□□□□ -2.07
SOX2P48431 Y_RNA.638-201ENST00000459374 113 ntBASIC2.13□□□□□ -2.07
SOX2P48431 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
SOX2P48431 RNU6-1041P-201ENST00000516254 102 ntBASIC2.13□□□□□ -2.07
SOX2P48431 RNU6-1337P-201ENST00000516525 95 ntBASIC2.13□□□□□ -2.07
SOX2P48431 RNA5SP82-201ENST00000516707 92 ntBASIC2.13□□□□□ -2.07
SOX2P48431 MIR4438-201ENST00000585271 93 ntBASIC2.13□□□□□ -2.07
SOX2P48431 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
SOX2P48431 AL078604.3-201ENST00000615580 211 ntBASIC2.13□□□□□ -2.07
SOX2P48431 snoU18.1-201ENST00000629629 71 ntBASIC2.13□□□□□ -2.07
SOX2P48431 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
SOX2P48431 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SOX2P48431 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
SOX2P48431 AL365361.1-201ENST00000566942 3481 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-23P-201ENST00000363283 107 ntBASIC2.12□□□□□ -2.07
SOX2P48431 Y_RNA.200-201ENST00000364018 102 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-801P-201ENST00000364087 105 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNA5SP493-201ENST00000364115 91 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-1164P-201ENST00000364428 107 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-200P-201ENST00000364743 107 ntBASIC2.12□□□□□ -2.07
SOX2P48431 Y_RNA.287-201ENST00000364853 94 ntBASIC2.12□□□□□ -2.07
SOX2P48431 Y_RNA.292-201ENST00000364904 97 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-211P-201ENST00000384047 107 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-763P-201ENST00000390865 106 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU6-907P-201ENST00000390924 102 ntBASIC2.12□□□□□ -2.07
SOX2P48431 MIR1298-201ENST00000408783 112 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNU2-52P-201ENST00000410680 190 ntBASIC2.12□□□□□ -2.07
SOX2P48431 ATP5J2P3-201ENST00000451550 258 ntBASIC2.12□□□□□ -2.07
SOX2P48431 SNORD109B-201ENST00000458961 67 ntBASIC2.12□□□□□ -2.07
SOX2P48431 SNORD109A-201ENST00000459128 67 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RN7SKP132-201ENST00000516001 208 ntBASIC2.12□□□□□ -2.07
SOX2P48431 SNORD116-28-201ENST00000516123 91 ntBASIC2.12□□□□□ -2.07
SOX2P48431 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
SOX2P48431 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.12□□□□□ -2.07
SOX2P48431 AC007336.1-201ENST00000576365 3828 ntBASIC2.12□□□□□ -2.07
SOX2P48431 AC130289.1-201ENST00000577321 73 ntBASIC2.12□□□□□ -2.07
SOX2P48431 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SOX2P48431 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SOX2P48431 AL356292.1-201ENST00000283110 373 ntBASIC2.11□□□□□ -2.07
SOX2P48431 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SOX2P48431 SNORA72.4-201ENST00000384174 132 ntBASIC2.11□□□□□ -2.07
SOX2P48431 RNU6-417P-201ENST00000384712 107 ntBASIC2.11□□□□□ -2.07
SOX2P48431 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
SOX2P48431 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms