Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.3□□□□□ -2.04
TM4SF4P48230 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.3□□□□□ -2.04
TM4SF4P48230 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 AC010598.1-201ENST00000510378 103 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.3□□□□□ -2.04
TM4SF4P48230 AC020661.2-201ENST00000560114 134 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 AC010205.1-201ENST00000616668 449 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 AC022140.2-201ENST00000623500 188 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 MIR338-201ENST00000636369 67 ntBASIC2.3□□□□□ -2.04
TM4SF4P48230 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TM4SF4P48230 RNU6-626P-201ENST00000363354 107 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 RNU6-961P-201ENST00000363893 105 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 SNORA16B-201ENST00000364674 135 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 RNU6-639P-201ENST00000384074 107 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 RNU6-20P-201ENST00000384106 107 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 AC096920.1-201ENST00000423991 241 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.29□□□□□ -2.04
TM4SF4P48230 RPS27P22-201ENST00000478056 241 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 SNORA25.15-201ENST00000516487 89 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 RNU1-142P-201ENST00000516682 145 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 RNU6-1153P-201ENST00000516760 105 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 AC027419.1-201ENST00000522976 328 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.29□□□□□ -2.04
TM4SF4P48230 AL359075.3-201ENST00000613288 217 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 AC040896.1-201ENST00000613819 479 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 AC004467.1-201ENST00000615678 330 ntBASIC2.29□□□□□ -2.04
TM4SF4P48230 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
TM4SF4P48230 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TM4SF4P48230 Y_RNA.122-201ENST00000363331 96 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 Y_RNA.158-201ENST00000363651 101 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 Y_RNA.551-201ENST00000384661 102 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 RNU5A-5P-201ENST00000411054 116 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 AC016909.1-201ENST00000415916 166 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TM4SF4P48230 RPL26P26-201ENST00000480251 434 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 SNORA70.12-201ENST00000516084 153 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.28□□□□□ -2.04
TM4SF4P48230 AC091932.3-201ENST00000624223 323 ntBASIC2.28□□□□□ -2.04
TM4SF4P48230 RNU6-1019P-201ENST00000364424 107 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 Y_RNA.422-201ENST00000384054 114 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 SNORD65B-201ENST00000459126 73 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 RNA5SP233-201ENST00000459153 113 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 RNVU1-2-201ENST00000516326 135 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 Y_RNA.715-201ENST00000517082 110 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 AC024995.1-201ENST00000523014 93 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 MIR5089-201ENST00000580047 84 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 AC008749.1-201ENST00000597650 306 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 CENPCP1-201ENST00000533085 2578 ntBASIC2.27□□□□□ -2.05
TM4SF4P48230 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TM4SF4P48230 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TM4SF4P48230 Y_RNA.152-201ENST00000363578 100 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 RNU6-407P-201ENST00000365280 104 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 Y_RNA.458-201ENST00000384240 102 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 SNORA67.5-201ENST00000391036 107 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 RNU6-1186P-201ENST00000410429 97 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.26□□□□□ -2.05
TM4SF4P48230 MIR4438-201ENST00000585271 93 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
TM4SF4P48230 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.25□□□□□ -2.05
TM4SF4P48230 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TM4SF4P48230 RNU6-324P-201ENST00000363957 106 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 Y_RNA.216-201ENST00000364205 93 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 RNU6-450P-201ENST00000364654 107 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 Y_RNA.380-201ENST00000365663 111 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 SNORA8-201ENST00000384574 139 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 RNU6-21P-201ENST00000384710 107 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 RNU6-823P-201ENST00000391042 103 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 RPEP5-201ENST00000441137 268 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.25□□□□□ -2.05
TM4SF4P48230 snoU13.18-201ENST00000459483 104 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 RNU6-155P-201ENST00000516347 100 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 SNORA40.15-201ENST00000516884 107 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
TM4SF4P48230 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.25□□□□□ -2.05
TM4SF4P48230 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
TM4SF4P48230 RNU6-694P-201ENST00000364071 147 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 SNORA33.2-201ENST00000365413 134 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 SNORA20B-201ENST00000384220 132 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 Y_RNA.455-201ENST00000384230 98 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 Y_RNA.462-201ENST00000384268 102 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 MIR520A-201ENST00000384862 85 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 AL627390.1-201ENST00000396055 340 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 RNU2-54P-201ENST00000410299 190 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 AC005002.2-201ENST00000438228 269 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 MTCYBP6-201ENST00000441810 138 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 MRPS10P1-201ENST00000448483 130 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 RNU7-110P-201ENST00000516891 62 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 RPL21P9-201ENST00000556149 474 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.24□□□□□ -2.05
TM4SF4P48230 AC006504.6-201ENST00000590142 199 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.24□□□□□ -2.05
TM4SF4P48230 AC011373.1-201ENST00000607270 237 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 U6.115-201ENST00000636045 103 ntBASIC2.24□□□□□ -2.05
TM4SF4P48230 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
TM4SF4P48230 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms