Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 AC016925.1-201ENST00000458303 298 ntBASIC2.55□□□□□ -2
NPTX2P47972 SNORD2.1-201ENST00000458762 69 ntBASIC2.55□□□□□ -2
NPTX2P47972 RNU7-57P-201ENST00000459540 60 ntBASIC2.55□□□□□ -2
NPTX2P47972 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
NPTX2P47972 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NPTX2P47972 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPTX2P47972 AC008413.1-201ENST00000511864 177 ntBASIC2.55□□□□□ -2
NPTX2P47972 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
NPTX2P47972 AC005828.6-201ENST00000606610 232 ntBASIC2.55□□□□□ -2
NPTX2P47972 AL590808.1-201ENST00000618696 141 ntBASIC2.55□□□□□ -2
NPTX2P47972 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.55□□□□□ -2
NPTX2P47972 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NPTX2P47972 MIR411-201ENST00000362239 96 ntBASIC2.54□□□□□ -2
NPTX2P47972 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
NPTX2P47972 Y_RNA.361-201ENST00000365515 120 ntBASIC2.54□□□□□ -2
NPTX2P47972 RNU6-975P-201ENST00000384296 105 ntBASIC2.54□□□□□ -2
NPTX2P47972 MIR548I3-201ENST00000408378 149 ntBASIC2.54□□□□□ -2
NPTX2P47972 MIR548I1-201ENST00000408810 149 ntBASIC2.54□□□□□ -2
NPTX2P47972 Y_RNA.626-201ENST00000411288 95 ntBASIC2.54□□□□□ -2
NPTX2P47972 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
NPTX2P47972 Y_RNA.638-201ENST00000459374 113 ntBASIC2.54□□□□□ -2
NPTX2P47972 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.54□□□□□ -2
NPTX2P47972 SNORD53-201ENST00000579969 78 ntBASIC2.54□□□□□ -2
NPTX2P47972 MIR4435-1-201ENST00000582552 80 ntBASIC2.54□□□□□ -2
NPTX2P47972 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
NPTX2P47972 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.54□□□□□ -2
NPTX2P47972 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
NPTX2P47972 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
NPTX2P47972 Y_RNA.29-201ENST00000362570 113 ntBASIC2.53□□□□□ -2
NPTX2P47972 SNORD14D-201ENST00000384390 87 ntBASIC2.53□□□□□ -2
NPTX2P47972 RNU2-48P-201ENST00000410694 191 ntBASIC2.53□□□□□ -2
NPTX2P47972 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
NPTX2P47972 AL135790.2-201ENST00000437701 267 ntBASIC2.53□□□□□ -2
NPTX2P47972 AC074290.1-201ENST00000448883 135 ntBASIC2.53□□□□□ -2
NPTX2P47972 AC016717.1-201ENST00000448918 286 ntBASIC2.53□□□□□ -2
NPTX2P47972 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
NPTX2P47972 COX6CP14-201ENST00000469580 174 ntBASIC2.53□□□□□ -2
NPTX2P47972 RNU6-182P-201ENST00000516970 105 ntBASIC2.53□□□□□ -2
NPTX2P47972 RNA5SP490-201ENST00000517141 136 ntBASIC2.53□□□□□ -2
NPTX2P47972 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.53□□□□□ -2
NPTX2P47972 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.53□□□□□ -2
NPTX2P47972 PRELID2P1-201ENST00000552837 301 ntBASIC2.53□□□□□ -2
NPTX2P47972 snoZ196.1-201ENST00000625269 89 ntBASIC2.53□□□□□ -2
NPTX2P47972 snoU18.1-201ENST00000629629 71 ntBASIC2.53□□□□□ -2
NPTX2P47972 RNU6-1272P-201ENST00000362776 107 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 RNU6-743P-201ENST00000364151 106 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 RNU6-438P-201ENST00000365561 103 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 RNU6-1248P-201ENST00000391096 64 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 RNA5SP508-201ENST00000411327 119 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 EDDM3CP-201ENST00000415977 425 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 PIGPP3-201ENST00000425307 415 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 AC024067.1-201ENST00000426199 223 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 AL138752.1-201ENST00000452964 351 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.52□□□□□ -2.01
NPTX2P47972 PRELID3BP1-201ENST00000457142 540 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 RNU6-221P-201ENST00000459541 99 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 CBX3P4-201ENST00000538909 354 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 AC098479.1-201ENST00000609225 154 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 AC073349.3-201ENST00000617616 186 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
NPTX2P47972 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPTX2P47972 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
NPTX2P47972 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
NPTX2P47972 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPTX2P47972 RNU6-418P-201ENST00000384035 107 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 RNU6-211P-201ENST00000384047 107 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 RNU6-209P-201ENST00000384118 107 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 AL357139.1-201ENST00000407792 426 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 SNORA3.2-201ENST00000408221 125 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 RNU6-57P-201ENST00000411348 103 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 BTF3P11-201ENST00000426582 477 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 Y_RNA.644-201ENST00000459006 113 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 AC018868.1-201ENST00000491307 315 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 Y_RNA.674-201ENST00000516362 113 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 AC024405.2-202ENST00000532731 184 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 NDUFA5P6-201ENST00000542110 379 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 AC091544.4-201ENST00000555268 342 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.51□□□□□ -2.01
NPTX2P47972 AL008718.3-201ENST00000610217 321 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 AC004792.1-201ENST00000614523 137 ntBASIC2.51□□□□□ -2.01
NPTX2P47972 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.51□□□□□ -2.01
NPTX2P47972 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPTX2P47972 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPTX2P47972 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NPTX2P47972 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPTX2P47972 AL355796.1-201ENST00000406706 323 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 SNORD23.1-201ENST00000408212 104 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 RNA5SP181-201ENST00000410246 98 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
NPTX2P47972 RNU6-991P-201ENST00000516168 107 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 MIR3684-201ENST00000579779 74 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.5□□□□□ -2.01
NPTX2P47972 AC012640.5-201ENST00000623897 319 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
NPTX2P47972 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPTX2P47972 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms