Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.17□□□□□ -2.38
RPL28P46779 FAM157A-202ENST00000615155 405 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AC022960.3-201ENST00000619794 441 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AC009248.2-201ENST00000619826 254 ntBASIC0.17□□□□□ -2.38
RPL28P46779 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AC100810.6-201ENST00000638068 285 ntBASIC0.17□□□□□ -2.38
RPL28P46779 SNORD113-7-201ENST00000363762 77 ntBASIC0.16□□□□□ -2.38
RPL28P46779 Y_RNA.179-201ENST00000363844 90 ntBASIC0.16□□□□□ -2.38
RPL28P46779 RNU6-1297P-201ENST00000384415 104 ntBASIC0.16□□□□□ -2.38
RPL28P46779 RNU6-342P-201ENST00000384521 104 ntBASIC0.16□□□□□ -2.38
RPL28P46779 MIR216A-201ENST00000385063 110 ntBASIC0.16□□□□□ -2.38
RPL28P46779 MIR140-201ENST00000385282 100 ntBASIC0.16□□□□□ -2.38
RPL28P46779 SNORD105-201ENST00000386910 85 ntBASIC0.16□□□□□ -2.38
RPL28P46779 MTATP6P19-201ENST00000413797 659 ntBASIC0.16□□□□□ -2.38
RPL28P46779 AL353193.1-201ENST00000421444 268 ntBASIC0.16□□□□□ -2.38
RPL28P46779 MTCO2P19-201ENST00000427513 598 ntBASIC0.16□□□□□ -2.38
RPL28P46779 MTND1P27-201ENST00000451117 902 ntBASIC0.16□□□□□ -2.38
RPL28P46779 RPS20P10-201ENST00000451209 253 ntBASIC0.16□□□□□ -2.38
RPL28P46779 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
RPL28P46779 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
RPL28P46779 UBL5P4-201ENST00000562584 236 ntBASIC0.16□□□□□ -2.38
RPL28P46779 SNORA4-201ENST00000584302 138 ntBASIC0.16□□□□□ -2.38
RPL28P46779 AC120024.3-201ENST00000603167 156 ntBASIC0.16□□□□□ -2.38
RPL28P46779 RMST_2.1-201ENST00000617263 136 ntBASIC0.16□□□□□ -2.38
RPL28P46779 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
RPL28P46779 AC073544.1-201ENST00000600110 1595 ntBASIC0.15□□□□□ -2.38
RPL28P46779 RNU6-348P-201ENST00000384386 107 ntBASIC0.15□□□□□ -2.39
RPL28P46779 MIR452-201ENST00000385020 85 ntBASIC0.15□□□□□ -2.39
RPL28P46779 CALM2P3-201ENST00000400429 449 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AC018865.2-201ENST00000423631 129 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AL353572.1-201ENST00000442490 417 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AC091885.1-201ENST00000506658 268 ntBASIC0.15□□□□□ -2.39
RPL28P46779 RNU7-41P-201ENST00000515917 61 ntBASIC0.15□□□□□ -2.39
RPL28P46779 RNA5SP20-201ENST00000515976 84 ntBASIC0.15□□□□□ -2.39
RPL28P46779 SNORA40.12-201ENST00000516329 111 ntBASIC0.15□□□□□ -2.39
RPL28P46779 RNU6-1332P-201ENST00000516666 104 ntBASIC0.15□□□□□ -2.39
RPL28P46779 RNU11-2P-201ENST00000516898 142 ntBASIC0.15□□□□□ -2.39
RPL28P46779 Z94722.1-201ENST00000604328 474 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AC027449.1-201ENST00000608890 407 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AC092807.2-201ENST00000609367 243 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AC022709.1-201ENST00000615967 87 ntBASIC0.15□□□□□ -2.39
RPL28P46779 MIR6515-201ENST00000619843 57 ntBASIC0.15□□□□□ -2.39
RPL28P46779 AC073534.2-201ENST00000620377 381 ntBASIC0.15□□□□□ -2.39
RPL28P46779 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
RPL28P46779 SNORA27.1-201ENST00000362604 124 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU4-66P-201ENST00000365199 138 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU6-1327P-201ENST00000365302 105 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU6-541P-201ENST00000384709 110 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU6-376P-201ENST00000384731 106 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU1-139P-201ENST00000391307 165 ntBASIC0.14□□□□□ -2.39
RPL28P46779 EIF4E2P1-201ENST00000393781 255 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU6-994P-201ENST00000410507 111 ntBASIC0.14□□□□□ -2.39
RPL28P46779 AC073464.1-201ENST00000429823 534 ntBASIC0.14□□□□□ -2.39
RPL28P46779 AL606489.2-201ENST00000433886 234 ntBASIC0.14□□□□□ -2.39
RPL28P46779 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.14□□□□□ -2.39
RPL28P46779 snoU13.18-201ENST00000459483 104 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RNU6-1208P-201ENST00000459588 107 ntBASIC0.14□□□□□ -2.39
RPL28P46779 RPL30P10-201ENST00000488148 337 ntBASIC0.14□□□□□ -2.39
RPL28P46779 MTCO2P30-201ENST00000503662 364 ntBASIC0.14□□□□□ -2.39
RPL28P46779 AC018710.1-201ENST00000506509 158 ntBASIC0.14□□□□□ -2.39
RPL28P46779 SNORA74.3-201ENST00000517108 154 ntBASIC0.14□□□□□ -2.39
RPL28P46779 AC040904.1-201ENST00000590850 223 ntBASIC0.14□□□□□ -2.39
RPL28P46779 AC007684.1-201ENST00000609671 477 ntBASIC0.14□□□□□ -2.39
RPL28P46779 AC007742.2-201ENST00000618226 398 ntBASIC0.14□□□□□ -2.39
RPL28P46779 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
RPL28P46779 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
RPL28P46779 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
RPL28P46779 AC121333.1-201ENST00000567488 2709 ntBASIC0.13□□□□□ -2.39
RPL28P46779 SNORD114-23-201ENST00000363536 72 ntBASIC0.13□□□□□ -2.39
RPL28P46779 RNA5SP48-201ENST00000363969 126 ntBASIC0.13□□□□□ -2.39
RPL28P46779 SNORD113.3-201ENST00000364630 78 ntBASIC0.13□□□□□ -2.39
RPL28P46779 RNU6-117P-201ENST00000365415 107 ntBASIC0.13□□□□□ -2.39
RPL28P46779 RNU4-20P-201ENST00000365601 151 ntBASIC0.13□□□□□ -2.39
RPL28P46779 Y_RNA.381-201ENST00000365666 102 ntBASIC0.13□□□□□ -2.39
RPL28P46779 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.13□□□□□ -2.39
RPL28P46779 MIR520C-201ENST00000385005 87 ntBASIC0.13□□□□□ -2.39
RPL28P46779 MIR520G-201ENST00000385064 90 ntBASIC0.13□□□□□ -2.39
RPL28P46779 MIR1298-201ENST00000408783 112 ntBASIC0.13□□□□□ -2.39
RPL28P46779 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.13□□□□□ -2.39
RPL28P46779 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.13□□□□□ -2.39
RPL28P46779 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.13□□□□□ -2.39
RPL28P46779 AL392103.1-201ENST00000447000 198 ntBASIC0.13□□□□□ -2.39
RPL28P46779 RNU7-187P-201ENST00000458985 68 ntBASIC0.13□□□□□ -2.39
RPL28P46779 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.13□□□□□ -2.39
RPL28P46779 RNA5SP401-201ENST00000515920 127 ntBASIC0.13□□□□□ -2.39
RPL28P46779 RNU6-1278P-201ENST00000516130 107 ntBASIC0.13□□□□□ -2.39
RPL28P46779 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.13□□□□□ -2.39
RPL28P46779 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.13□□□□□ -2.39
RPL28P46779 AC026371.1-201ENST00000551867 419 ntBASIC0.13□□□□□ -2.39
RPL28P46779 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.13□□□□□ -2.39
RPL28P46779 MIR3684-201ENST00000579779 74 ntBASIC0.13□□□□□ -2.39
RPL28P46779 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
RPL28P46779 AC010999.1-201ENST00000611856 324 ntBASIC0.13□□□□□ -2.39
RPL28P46779 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.13□□□□□ -2.39
RPL28P46779 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
RPL28P46779 Y_RNA.269-201ENST00000364685 89 ntBASIC0.12□□□□□ -2.39
RPL28P46779 Y_RNA.354-201ENST00000365448 111 ntBASIC0.12□□□□□ -2.39
RPL28P46779 MIR598-201ENST00000384868 97 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms