Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNRPGP1-201ENST00000553864 222 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC138207.3-201ENST00000585289 166 ntBASIC-0.8□□□□□ -2.54
HTTP42858 DPPA3P3-201ENST00000603842 430 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.8□□□□□ -2.54
HTTP42858 AL139418.1-201ENST00000613613 177 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC244669.1-204ENST00000621564 178 ntBASIC-0.8□□□□□ -2.54
HTTP42858 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNA5SP201-201ENST00000410316 124 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC090960.1-201ENST00000421072 306 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.81□□□□□ -2.54
HTTP42858 AC010486.3-201ENST00000511602 785 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.81□□□□□ -2.54
HTTP42858 MIR5006-201ENST00000583027 110 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC005520.5-201ENST00000613926 164 ntBASIC-0.81□□□□□ -2.54
HTTP42858 U6.101-201ENST00000637707 76 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNU6-424P-201ENST00000384367 105 ntBASIC-0.81□□□□□ -2.54
HTTP42858 SNORA24.1-201ENST00000384401 135 ntBASIC-0.81□□□□□ -2.54
HTTP42858 MIR876-201ENST00000401147 81 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC016907.1-201ENST00000419483 435 ntBASIC-0.81□□□□□ -2.54
HTTP42858 HSFY7P-201ENST00000432672 318 ntBASIC-0.81□□□□□ -2.54
HTTP42858 HSFY8P-201ENST00000437934 318 ntBASIC-0.81□□□□□ -2.54
HTTP42858 POLR2KP2-201ENST00000438155 177 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC079781.2-201ENST00000446424 169 ntBASIC-0.81□□□□□ -2.54
HTTP42858 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.81□□□□□ -2.54
HTTP42858 AC006026.2-201ENST00000457376 180 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC022447.4-201ENST00000504053 364 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNU6-469P-201ENST00000516253 101 ntBASIC-0.81□□□□□ -2.54
HTTP42858 AC090502.2-201ENST00000549267 280 ntBASIC-0.81□□□□□ -2.54
HTTP42858 MIR4770-201ENST00000579149 58 ntBASIC-0.81□□□□□ -2.54
HTTP42858 POLR3GP2-201ENST00000588366 668 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNU1-29P-201ENST00000606574 126 ntBASIC-0.81□□□□□ -2.54
HTTP42858 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RMST_7.1-201ENST00000621935 268 ntBASIC-0.81□□□□□ -2.54
HTTP42858 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.82□□□□□ -2.54
HTTP42858 RNU4-66P-201ENST00000365199 138 ntBASIC-0.82□□□□□ -2.54
HTTP42858 MIR517B-201ENST00000385102 67 ntBASIC-0.82□□□□□ -2.54
HTTP42858 MIR1257-201ENST00000408490 117 ntBASIC-0.82□□□□□ -2.54
HTTP42858 AC004866.1-201ENST00000411748 78 ntBASIC-0.82□□□□□ -2.54
HTTP42858 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.82□□□□□ -2.54
HTTP42858 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.82□□□□□ -2.54
HTTP42858 RNY4-201ENST00000516507 96 ntBASIC-0.82□□□□□ -2.54
HTTP42858 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.82□□□□□ -2.54
HTTP42858 AL049777.1-201ENST00000622740 518 ntBASIC-0.82□□□□□ -2.54
HTTP42858 AC091304.10-201ENST00000641554 121 ntBASIC-0.82□□□□□ -2.54
HTTP42858 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.82□□□□□ -2.54
HTTP42858 SNORD115-2-201ENST00000362842 82 ntBASIC-0.82□□□□□ -2.54
HTTP42858 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.82□□□□□ -2.54
HTTP42858 RNU4-28P-201ENST00000364739 141 ntBASIC-0.82□□□□□ -2.54
HTTP42858 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.82□□□□□ -2.54
HTTP42858 SNORD114-29-201ENST00000364819 70 ntBASIC-0.82□□□□□ -2.54
HTTP42858 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.82□□□□□ -2.54
HTTP42858 AC008752.3-201ENST00000588113 712 ntBASIC-0.82□□□□□ -2.54
HTTP42858 MIR6502-201ENST00000617296 76 ntBASIC-0.82□□□□□ -2.54
HTTP42858 RNU6-114P-201ENST00000384704 105 ntBASIC-0.82□□□□□ -2.54
HTTP42858 AC104629.1-201ENST00000494226 508 ntBASIC-0.82□□□□□ -2.54
HTTP42858 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.82□□□□□ -2.54
HTTP42858 RNU7-99P-201ENST00000516271 62 ntBASIC-0.82□□□□□ -2.54
HTTP42858 RNU6-856P-201ENST00000516959 98 ntBASIC-0.82□□□□□ -2.54
HTTP42858 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.82□□□□□ -2.54
HTTP42858 MIR4753-201ENST00000585119 83 ntBASIC-0.82□□□□□ -2.54
HTTP42858 RNU6-86P-201ENST00000606534 107 ntBASIC-0.82□□□□□ -2.54
HTTP42858 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.83□□□□□ -2.54
HTTP42858 RNU6-580P-201ENST00000365159 107 ntBASIC-0.83□□□□□ -2.54
HTTP42858 SNORD115-44-201ENST00000365391 82 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AC117470.1-201ENST00000381974 330 ntBASIC-0.83□□□□□ -2.54
HTTP42858 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.83□□□□□ -2.54
HTTP42858 MIR9-2-201ENST00000384838 87 ntBASIC-0.83□□□□□ -2.54
HTTP42858 MIR1283-1-201ENST00000408494 87 ntBASIC-0.83□□□□□ -2.54
HTTP42858 RNU2-54P-201ENST00000410299 190 ntBASIC-0.83□□□□□ -2.54
HTTP42858 RNU6-77P-201ENST00000410554 91 ntBASIC-0.83□□□□□ -2.54
HTTP42858 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.83□□□□□ -2.54
HTTP42858 AC010975.2-201ENST00000427781 588 ntBASIC-0.83□□□□□ -2.54
HTTP42858 USP9YP16-201ENST00000430287 407 ntBASIC-0.83□□□□□ -2.54
HTTP42858 MTCO3P38-201ENST00000468910 766 ntBASIC-0.83□□□□□ -2.54
HTTP42858 RNU7-128P-201ENST00000517247 62 ntBASIC-0.83□□□□□ -2.54
HTTP42858 SNORA28-201ENST00000606769 126 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AC099786.3-201ENST00000565735 1410 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AC010332.2-201ENST00000613083 1904 ntBASIC-0.83□□□□□ -2.54
HTTP42858 RNU6-562P-201ENST00000362731 107 ntBASIC-0.83□□□□□ -2.54
HTTP42858 SNORD56.1-201ENST00000362913 68 ntBASIC-0.83□□□□□ -2.54
HTTP42858 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
HTTP42858 CALM2P2-201ENST00000428512 440 ntBASIC-0.83□□□□□ -2.54
HTTP42858 SNORD18.2-201ENST00000459604 70 ntBASIC-0.83□□□□□ -2.54
HTTP42858 RNU6-914P-201ENST00000516749 109 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AP001189.2-201ENST00000527320 189 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.83□□□□□ -2.54
HTTP42858 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.83□□□□□ -2.54
HTTP42858 AC253576.2-201ENST00000618815 580 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AC073869.9-201ENST00000641610 120 ntBASIC-0.83□□□□□ -2.54
HTTP42858 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.84□□□□□ -2.54
HTTP42858 SNORD28-201ENST00000384706 75 ntBASIC-0.84□□□□□ -2.54
HTTP42858 MIR15B-201ENST00000385045 98 ntBASIC-0.84□□□□□ -2.54
HTTP42858 MIR300-201ENST00000401138 83 ntBASIC-0.84□□□□□ -2.54
HTTP42858 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.84□□□□□ -2.54
HTTP42858 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.84□□□□□ -2.54
HTTP42858 AC010486.2-201ENST00000505572 483 ntBASIC-0.84□□□□□ -2.54
HTTP42858 SNORD22.1-201ENST00000516331 125 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms