Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.67□□□□□ -2.3
RFC3P40938 RNU1-133P-201ENST00000364867 167 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RNU6-259P-201ENST00000383999 107 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RNU1-139P-201ENST00000391307 165 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
RFC3P40938 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.66□□□□□ -2.3
RFC3P40938 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.66□□□□□ -2.3
RFC3P40938 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
RFC3P40938 AC093850.1-201ENST00000454121 251 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RNU7-21P-201ENST00000459430 62 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RNU2-56P-201ENST00000516826 190 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RNU6-341P-201ENST00000516973 96 ntBASIC0.66□□□□□ -2.3
RFC3P40938 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
RFC3P40938 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.66□□□□□ -2.3
RFC3P40938 AP002001.1-203ENST00000534002 267 ntBASIC0.66□□□□□ -2.3
RFC3P40938 AL512360.1-201ENST00000555346 234 ntBASIC0.66□□□□□ -2.3
RFC3P40938 RPL21P9-201ENST00000556149 474 ntBASIC0.66□□□□□ -2.3
RFC3P40938 PRELID3BP2-201ENST00000605362 201 ntBASIC0.66□□□□□ -2.3
RFC3P40938 AC124303.1-201ENST00000605703 360 ntBASIC0.66□□□□□ -2.3
RFC3P40938 AC019193.3-201ENST00000609144 554 ntBASIC0.66□□□□□ -2.3
RFC3P40938 AC010999.1-201ENST00000611856 324 ntBASIC0.66□□□□□ -2.3
RFC3P40938 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RFC3P40938 Y_RNA.135-201ENST00000363439 95 ntBASIC0.65□□□□□ -2.31
RFC3P40938 Y_RNA.530-201ENST00000384587 101 ntBASIC0.65□□□□□ -2.31
RFC3P40938 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
RFC3P40938 Y_RNA.615-201ENST00000410769 117 ntBASIC0.65□□□□□ -2.31
RFC3P40938 ZNF885P-201ENST00000420174 1098 ntBASIC0.65□□□□□ -2.31
RFC3P40938 AC243428.1-201ENST00000421099 264 ntBASIC0.65□□□□□ -2.31
RFC3P40938 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.65□□□□□ -2.31
RFC3P40938 RNU7-66P-201ENST00000459469 62 ntBASIC0.65□□□□□ -2.31
RFC3P40938 AP000870.1-201ENST00000472927 406 ntBASIC0.65□□□□□ -2.31
RFC3P40938 RNU7-175P-201ENST00000515915 61 ntBASIC0.65□□□□□ -2.31
RFC3P40938 RNU7-12P-201ENST00000516030 62 ntBASIC0.65□□□□□ -2.31
RFC3P40938 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
RFC3P40938 RNU6-256P-201ENST00000516747 97 ntBASIC0.65□□□□□ -2.31
RFC3P40938 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.65□□□□□ -2.31
RFC3P40938 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
RFC3P40938 MIR3684-201ENST00000579779 74 ntBASIC0.65□□□□□ -2.31
RFC3P40938 AC091178.2-201ENST00000584401 117 ntBASIC0.65□□□□□ -2.31
RFC3P40938 MIR3611-201ENST00000584484 83 ntBASIC0.65□□□□□ -2.31
RFC3P40938 AC004832.4-201ENST00000608952 331 ntBASIC0.65□□□□□ -2.31
RFC3P40938 DISC2.1-201ENST00000612827 205 ntBASIC0.65□□□□□ -2.31
RFC3P40938 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RFC3P40938 AC005592.1-201ENST00000566527 1640 ntBASIC0.64□□□□□ -2.31
RFC3P40938 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RFC3P40938 RNU6-1252P-201ENST00000363054 104 ntBASIC0.64□□□□□ -2.31
RFC3P40938 Y_RNA.112-201ENST00000363250 102 ntBASIC0.64□□□□□ -2.31
RFC3P40938 SNORA20B-201ENST00000384220 132 ntBASIC0.64□□□□□ -2.31
RFC3P40938 MIR613-201ENST00000385248 95 ntBASIC0.64□□□□□ -2.31
RFC3P40938 RNA5SP482-201ENST00000391269 118 ntBASIC0.64□□□□□ -2.31
RFC3P40938 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.64□□□□□ -2.31
RFC3P40938 LINC01399-202ENST00000458450 244 ntBASIC0.64□□□□□ -2.31
RFC3P40938 RNU7-90P-201ENST00000459216 62 ntBASIC0.64□□□□□ -2.31
RFC3P40938 HMGN2P26-201ENST00000463169 339 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AC107401.1-201ENST00000503426 685 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AC010486.3-201ENST00000511602 785 ntBASIC0.64□□□□□ -2.31
RFC3P40938 SNORA70.12-201ENST00000516084 153 ntBASIC0.64□□□□□ -2.31
RFC3P40938 Y_RNA.683-201ENST00000516508 93 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AP002004.2-201ENST00000531656 154 ntBASIC0.64□□□□□ -2.31
RFC3P40938 MTND1P15-201ENST00000579262 949 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AL162413.1-201ENST00000603198 110 ntBASIC0.64□□□□□ -2.31
RFC3P40938 AC092954.2-201ENST00000609103 430 ntBASIC0.64□□□□□ -2.31
RFC3P40938 CASC19-280ENST00000642102 1351 ntBASIC0.63□□□□□ -2.31
RFC3P40938 MIRLET7C-201ENST00000362160 84 ntBASIC0.63□□□□□ -2.31
RFC3P40938 SNORA1B-201ENST00000362535 133 ntBASIC0.63□□□□□ -2.31
RFC3P40938 SNORD116-13-201ENST00000384408 92 ntBASIC0.63□□□□□ -2.31
RFC3P40938 SNORA75.2-201ENST00000391138 150 ntBASIC0.63□□□□□ -2.31
RFC3P40938 SNORA75.3-201ENST00000391231 150 ntBASIC0.63□□□□□ -2.31
RFC3P40938 RNU6-908P-201ENST00000410160 94 ntBASIC0.63□□□□□ -2.31
RFC3P40938 RNU2-66P-201ENST00000410650 161 ntBASIC0.63□□□□□ -2.31
RFC3P40938 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.63□□□□□ -2.31
RFC3P40938 MTATP6P13-201ENST00000438531 667 ntBASIC0.63□□□□□ -2.31
RFC3P40938 AC245047.8-201ENST00000456455 284 ntBASIC0.63□□□□□ -2.31
RFC3P40938 RNU6-1281P-201ENST00000516223 105 ntBASIC0.63□□□□□ -2.31
RFC3P40938 RNU6-107P-201ENST00000516643 102 ntBASIC0.63□□□□□ -2.31
RFC3P40938 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.63□□□□□ -2.31
RFC3P40938 AL117336.2-201ENST00000602435 335 ntBASIC0.63□□□□□ -2.31
RFC3P40938 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
RFC3P40938 Y_RNA.267-201ENST00000364679 109 ntBASIC0.62□□□□□ -2.31
RFC3P40938 RNU6-596P-201ENST00000365395 98 ntBASIC0.62□□□□□ -2.31
RFC3P40938 RNU6-281P-201ENST00000384212 103 ntBASIC0.62□□□□□ -2.31
RFC3P40938 Y_RNA.466-201ENST00000384294 113 ntBASIC0.62□□□□□ -2.31
RFC3P40938 RNU6-1105P-201ENST00000384774 107 ntBASIC0.62□□□□□ -2.31
RFC3P40938 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
RFC3P40938 AC104332.1-201ENST00000440471 797 ntBASIC0.62□□□□□ -2.31
RFC3P40938 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.62□□□□□ -2.31
RFC3P40938 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.62□□□□□ -2.31
RFC3P40938 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.62□□□□□ -2.31
RFC3P40938 AC019235.1-201ENST00000503847 207 ntBASIC0.62□□□□□ -2.31
RFC3P40938 RNA5SP480-201ENST00000516840 109 ntBASIC0.62□□□□□ -2.31
RFC3P40938 MIR3672-201ENST00000584290 82 ntBASIC0.62□□□□□ -2.31
RFC3P40938 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
RFC3P40938 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.62□□□□□ -2.31
RFC3P40938 RNA5SP361-201ENST00000362686 118 ntBASIC0.61□□□□□ -2.31
RFC3P40938 Y_RNA.212-201ENST00000364177 102 ntBASIC0.61□□□□□ -2.31
RFC3P40938 Y_RNA.256-201ENST00000364594 104 ntBASIC0.61□□□□□ -2.31
RFC3P40938 MTCYBP4-201ENST00000401524 249 ntBASIC0.61□□□□□ -2.31
RFC3P40938 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms