Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-128P-201ENST00000383976 107 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 RNA5SP299-201ENST00000391203 116 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.51□□□□□ -2.33
COL18A1P39060 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.51□□□□□ -2.33
COL18A1P39060 RNU6-956P-201ENST00000458868 103 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 RNU7-90P-201ENST00000459216 62 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AC083798.1-201ENST00000472671 131 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 PDCD5P2-201ENST00000507570 312 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AL590705.4-201ENST00000532209 134 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 FRG2DP-202ENST00000566967 323 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 MIR4760-201ENST00000585040 80 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 MIR4438-201ENST00000585271 93 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AC119751.7-201ENST00000600494 245 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AC012557.2-201ENST00000605919 418 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 AP001330.5-201ENST00000607176 411 ntBASIC0.51□□□□□ -2.33
COL18A1P39060 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
COL18A1P39060 SNORD50.1-201ENST00000362987 71 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 Y_RNA.179-201ENST00000363844 90 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 SNORD87-201ENST00000364849 89 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 MIR942-201ENST00000401111 86 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 RNA5SP504-201ENST00000410676 117 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.5□□□□□ -2.33
COL18A1P39060 MTCO2P30-201ENST00000503662 364 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 RNU7-12P-201ENST00000516030 62 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 RNA5SP454-201ENST00000517231 127 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 LRRC34P1-201ENST00000542742 915 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 POLR3GP2-201ENST00000588366 668 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COL18A1P39060 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COL18A1P39060 RNU6-254P-201ENST00000363377 107 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 SNORA75-201ENST00000384158 137 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 MIR487A-201ENST00000385009 80 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 MIR100-201ENST00000385259 80 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 AF228730.1-201ENST00000397972 663 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 RNU4-55P-201ENST00000410731 137 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 MTND4P18-201ENST00000447010 465 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 AC010469.2-201ENST00000496412 480 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 AC010598.1-201ENST00000510378 103 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 RNU7-128P-201ENST00000517247 62 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 FAM157A-202ENST00000615155 405 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
COL18A1P39060 CASC19-280ENST00000642102 1351 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 Y_RNA.151-201ENST00000363566 112 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 Y_RNA.319-201ENST00000365138 92 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 RNY4P3-201ENST00000365254 95 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 Y_RNA.363-201ENST00000365529 113 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 Y_RNA.582-201ENST00000391023 95 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 CALM2P3-201ENST00000400429 449 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.49□□□□□ -2.33
COL18A1P39060 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.49□□□□□ -2.33
COL18A1P39060 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.49□□□□□ -2.33
COL18A1P39060 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.49□□□□□ -2.33
COL18A1P39060 RPS26P48-201ENST00000491713 339 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 AC009248.2-201ENST00000619826 254 ntBASIC0.49□□□□□ -2.33
COL18A1P39060 AP000568.1-201ENST00000282964 442 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 SNORD113-7-201ENST00000363762 77 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU6-873P-201ENST00000363833 107 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU6-1042P-201ENST00000384204 107 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU6-793P-201ENST00000384233 104 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 MTCYBP4-201ENST00000401524 249 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AC006461.1-201ENST00000412637 326 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.48□□□□□ -2.33
COL18A1P39060 FABP5P4-201ENST00000437203 171 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.48□□□□□ -2.33
COL18A1P39060 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.48□□□□□ -2.33
COL18A1P39060 snoU13.19-201ENST00000459148 104 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AC022493.2-201ENST00000506122 481 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU6-197P-201ENST00000516680 100 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AP002001.1-203ENST00000534002 267 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 MIR4778-201ENST00000577635 80 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AC121247.2-201ENST00000604776 136 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU6-89P-201ENST00000606519 100 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 AL158209.2-201ENST00000619266 216 ntBASIC0.48□□□□□ -2.33
COL18A1P39060 RNU6-727P-201ENST00000363592 107 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 RNU6-424P-201ENST00000384367 105 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 MIR329-1-201ENST00000385028 80 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 RNA5SP482-201ENST00000391269 118 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 U8.16-201ENST00000391279 133 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 MTCO3P19-201ENST00000415864 321 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 MTCO1P20-201ENST00000425366 358 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 MTCO2P7-201ENST00000446518 666 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.47□□□□□ -2.33
COL18A1P39060 AC079354.2-201ENST00000453523 154 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 ACA59.1-201ENST00000515966 143 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.47□□□□□ -2.33
COL18A1P39060 AC106800.4-201ENST00000614905 153 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 Y_RNA.100-201ENST00000363141 102 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 Y_RNA.184-201ENST00000363884 108 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 Y_RNA.373-201ENST00000365600 103 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 AC092447.3-201ENST00000426027 686 ntBASIC0.47□□□□□ -2.33
COL18A1P39060 Z82188.1-201ENST00000436709 154 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms