Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.46□□□□□ -2.02
COL15A1P39059 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.46□□□□□ -2.02
COL15A1P39059 MIR4503-201ENST00000582187 83 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.46□□□□□ -2.02
COL15A1P39059 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.46□□□□□ -2.02
COL15A1P39059 AP000942.4-201ENST00000604811 241 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 AC004467.1-201ENST00000615678 330 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 U4.1-201ENST00000620349 87 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 MIR8062-201ENST00000621515 85 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
COL15A1P39059 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.45□□□□□ -2.02
COL15A1P39059 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL15A1P39059 RNU1-52P-201ENST00000384190 164 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 Y_RNA.556-201ENST00000384677 113 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 MIR548B-201ENST00000385247 97 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 RNU6-121P-201ENST00000410525 99 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 RPL21P38-201ENST00000418090 167 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 AC096920.1-201ENST00000423991 241 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 TOMM22P2-201ENST00000430735 237 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 AL137159.1-201ENST00000452808 512 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 RNU6-717P-201ENST00000459076 104 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 RNU7-57P-201ENST00000459540 60 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 AC098869.1-201ENST00000481627 292 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 SEPT14P8-201ENST00000508026 178 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 MYL12BP1-201ENST00000569826 507 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 MIR3149-201ENST00000584629 83 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 AL109918.3-201ENST00000603072 338 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 AC006001.4-201ENST00000622243 395 ntBASIC2.45□□□□□ -2.02
COL15A1P39059 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL15A1P39059 RNU4-30P-201ENST00000410245 143 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 NDUFB4P10-201ENST00000452541 359 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 AC018868.1-201ENST00000491307 315 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 AC093259.1-201ENST00000509755 300 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 AC025465.3-201ENST00000510570 311 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 SNORA4.4-201ENST00000515921 135 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 AC006380.1-201ENST00000603598 186 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 SNORD113-5-201ENST00000607261 78 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 AC091932.3-201ENST00000624223 323 ntBASIC2.44□□□□□ -2.02
COL15A1P39059 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.44□□□□□ -2.02
COL15A1P39059 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.44□□□□□ -2.02
COL15A1P39059 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.44□□□□□ -2.02
COL15A1P39059 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL15A1P39059 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL15A1P39059 Y_RNA.331-201ENST00000365267 102 ntBASIC2.43□□□□□ -2.02
COL15A1P39059 Y_RNA.570-201ENST00000384750 101 ntBASIC2.43□□□□□ -2.02
COL15A1P39059 RNU2-48P-201ENST00000410694 191 ntBASIC2.43□□□□□ -2.02
COL15A1P39059 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.43□□□□□ -2.02
COL15A1P39059 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
COL15A1P39059 RNU6-948P-201ENST00000516374 107 ntBASIC2.43□□□□□ -2.02
COL15A1P39059 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COL15A1P39059 RNU6-457P-201ENST00000363999 107 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNU6-702P-201ENST00000364982 107 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNA5SP190-201ENST00000365222 118 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 Y_RNA.376-201ENST00000365638 108 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNU6-418P-201ENST00000384035 107 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 Y_RNA.452-201ENST00000384202 108 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNU6-975P-201ENST00000384296 105 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNU6-57P-201ENST00000411348 103 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNA5SP270-201ENST00000411361 118 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 AC016717.1-201ENST00000448918 286 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 PRELID3BP1-201ENST00000457142 540 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 TRBVB-201ENST00000477100 408 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RPS29P11-201ENST00000496507 171 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 RNA5SP82-201ENST00000516707 92 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 AC055872.1-201ENST00000570978 278 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 MIR4255-201ENST00000579351 72 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 MIR3683-201ENST00000580847 82 ntBASIC2.42□□□□□ -2.02
COL15A1P39059 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.42□□□□□ -2.02
COL15A1P39059 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
COL15A1P39059 RNU4-90P-201ENST00000362773 141 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 Y_RNA.288-201ENST00000364854 92 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 SNORD14D-201ENST00000384390 87 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 MIR215-201ENST00000384858 110 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AL627390.1-201ENST00000396055 340 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 SRIP3-201ENST00000413200 219 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.41□□□□□ -2.02
COL15A1P39059 AC123900.1-201ENST00000420390 96 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AC005042.3-201ENST00000453230 174 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AC005840.1-201ENST00000498412 377 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 HMGB3P3-201ENST00000510526 400 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 RNU6-155P-201ENST00000516347 100 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AC004817.2-201ENST00000561794 651 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.41□□□□□ -2.02
COL15A1P39059 MIR4423-201ENST00000580922 80 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 SNORA4-201ENST00000584302 138 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 AC084768.2-201ENST00000622736 221 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 snoZ196.1-201ENST00000625269 89 ntBASIC2.41□□□□□ -2.02
COL15A1P39059 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL15A1P39059 MIR410-201ENST00000362222 80 ntBASIC2.4□□□□□ -2.02
COL15A1P39059 Y_RNA.396-201ENST00000383949 103 ntBASIC2.4□□□□□ -2.02
COL15A1P39059 Y_RNA.446-201ENST00000384178 104 ntBASIC2.4□□□□□ -2.02
COL15A1P39059 MIR1185-2-201ENST00000408687 86 ntBASIC2.4□□□□□ -2.02
COL15A1P39059 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.4□□□□□ -2.02
COL15A1P39059 AP002001.1-203ENST00000534002 267 ntBASIC2.4□□□□□ -2.02
COL15A1P39059 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.4□□□□□ -2.02
COL15A1P39059 AC026271.5-201ENST00000577873 130 ntBASIC2.4□□□□□ -2.02
COL15A1P39059 AC022441.3-201ENST00000605737 136 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms