Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RPS26P55-201ENST00000471178 356 ntBASIC1.37□□□□□ -2.19
TRIM23P36406 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM23P36406 AL163195.1-201ENST00000496941 348 ntBASIC1.37□□□□□ -2.19
TRIM23P36406 RNU7-4P-201ENST00000516961 62 ntBASIC1.37□□□□□ -2.19
TRIM23P36406 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
TRIM23P36406 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM23P36406 FRG2DP-202ENST00000566967 323 ntBASIC1.37□□□□□ -2.19
TRIM23P36406 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
TRIM23P36406 SNORA33-201ENST00000363664 130 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 RNU6-879P-201ENST00000364328 108 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 Y_RNA.358-201ENST00000365491 99 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 RNU6-1297P-201ENST00000384415 104 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 RNU6-310P-201ENST00000384655 107 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 MIR194-1-201ENST00000384892 85 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 RNU6-321P-201ENST00000410912 106 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 Y_RNA.646-201ENST00000410980 101 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 AC114482.1-201ENST00000418010 247 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 Y_RNA.653-201ENST00000459091 95 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 MIR2053-201ENST00000459295 91 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 MTND4P17-201ENST00000470444 350 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.36□□□□□ -2.19
TRIM23P36406 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 FGF7P4-201ENST00000509595 295 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 RNU7-128P-201ENST00000517247 62 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM23P36406 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM23P36406 MIR4781-201ENST00000585250 76 ntBASIC1.36□□□□□ -2.19
TRIM23P36406 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM23P36406 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM23P36406 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM23P36406 AL391987.6-201ENST00000305671 199 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-1301P-201ENST00000362724 104 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 Y_RNA.70-201ENST00000362886 110 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-99P-201ENST00000364721 107 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-1310P-201ENST00000384153 107 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 SNORA69.1-201ENST00000390904 137 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM23P36406 MTCO3P19-201ENST00000415864 321 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 AC010154.1-201ENST00000425857 269 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 MRPS10P1-201ENST00000448483 130 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 RPS27P1-201ENST00000450552 247 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 ELOCP24-201ENST00000456370 334 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-559P-201ENST00000516151 98 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-107P-201ENST00000516643 102 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-902P-201ENST00000517212 91 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 AC144568.1-201ENST00000520139 137 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 AC018448.1-201ENST00000552843 316 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 MIR4709-201ENST00000577272 72 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 AL162424.1-201ENST00000602325 221 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TRIM23P36406 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
TRIM23P36406 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRIM23P36406 RNU6-1123P-201ENST00000362347 106 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 SNORA72.1-201ENST00000363485 129 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 RNU6-318P-201ENST00000384283 103 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 Y_RNA.498-201ENST00000384460 102 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 RNU6-1156P-201ENST00000410365 100 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 RN7SKP200-201ENST00000410564 320 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 MTND4P28-201ENST00000426217 387 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM23P36406 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM23P36406 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC005840.1-201ENST00000498412 377 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 RNU6-470P-201ENST00000515954 104 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 RNU6-277P-201ENST00000516272 106 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 RNU6-911P-201ENST00000516523 104 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC022868.1-201ENST00000517767 391 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM23P36406 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.34□□□□□ -2.19
TRIM23P36406 MIR4801-201ENST00000582704 82 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC005828.6-201ENST00000606610 232 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM23P36406 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.34□□□□□ -2.19
TRIM23P36406 AC095038.3-201ENST00000634439 195 ntBASIC1.34□□□□□ -2.19
TRIM23P36406 AC073544.1-201ENST00000600110 1595 ntBASIC1.34□□□□□ -2.2
TRIM23P36406 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
TRIM23P36406 RNA5SP361-201ENST00000362686 118 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RNU6-490P-201ENST00000362985 107 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 Y_RNA.226-201ENST00000364337 114 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 Y_RNA.384-201ENST00000383909 102 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RNU6-890P-201ENST00000384121 107 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RPL21P1-201ENST00000399532 476 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 Y_RNA.592-201ENST00000410274 109 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM23P36406 AC099799.1-201ENST00000439809 192 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 U8.22-201ENST00000459141 133 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RNU7-34P-201ENST00000459394 64 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 AC022493.2-201ENST00000506122 481 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM23P36406 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
TRIM23P36406 RNU6-1213P-201ENST00000517075 94 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms