Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MIR5695-201ENST00000579717 85 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC125232.2-201ENST00000592457 143 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC010900.2-201ENST00000604508 210 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.11□□□□□ -2.07
KRT9P35527 MIR8062-201ENST00000621515 85 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC091932.3-201ENST00000624223 323 ntBASIC2.11□□□□□ -2.07
KRT9P35527 U6.104-201ENST00000637979 90 ntBASIC2.11□□□□□ -2.07
KRT9P35527 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRT9P35527 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRT9P35527 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
KRT9P35527 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRT9P35527 RNU6-727P-201ENST00000363592 107 ntBASIC2.1□□□□□ -2.07
KRT9P35527 Y_RNA.288-201ENST00000364854 92 ntBASIC2.1□□□□□ -2.07
KRT9P35527 RNU6-793P-201ENST00000384233 104 ntBASIC2.1□□□□□ -2.07
KRT9P35527 Y_RNA.489-201ENST00000384410 101 ntBASIC2.1□□□□□ -2.07
KRT9P35527 MIR1302-6-201ENST00000408466 90 ntBASIC2.1□□□□□ -2.07
KRT9P35527 RNU6-57P-201ENST00000411348 103 ntBASIC2.1□□□□□ -2.07
KRT9P35527 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.1□□□□□ -2.07
KRT9P35527 AC010409.1-201ENST00000487382 476 ntBASIC2.1□□□□□ -2.07
KRT9P35527 RNU6-1143P-201ENST00000516125 104 ntBASIC2.1□□□□□ -2.07
KRT9P35527 SNORA40.15-201ENST00000516884 107 ntBASIC2.1□□□□□ -2.07
KRT9P35527 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
KRT9P35527 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.1□□□□□ -2.07
KRT9P35527 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRT9P35527 RNU6-379P-201ENST00000363813 104 ntBASIC2.09□□□□□ -2.07
KRT9P35527 Y_RNA.179-201ENST00000363844 90 ntBASIC2.09□□□□□ -2.07
KRT9P35527 Y_RNA.276-201ENST00000364732 109 ntBASIC2.09□□□□□ -2.07
KRT9P35527 SNORD87-201ENST00000364849 89 ntBASIC2.09□□□□□ -2.07
KRT9P35527 RNU1-139P-201ENST00000391307 165 ntBASIC2.09□□□□□ -2.07
KRT9P35527 RPL21P1-201ENST00000399532 476 ntBASIC2.09□□□□□ -2.07
KRT9P35527 MIR190B-201ENST00000401119 79 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AL117342.1-201ENST00000404861 406 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AL591806.2-201ENST00000433122 173 ntBASIC2.09□□□□□ -2.07
KRT9P35527 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRT9P35527 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.09□□□□□ -2.07
KRT9P35527 snoU13.15-201ENST00000459407 104 ntBASIC2.09□□□□□ -2.07
KRT9P35527 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.09□□□□□ -2.07
KRT9P35527 UBL5P3-201ENST00000475112 231 ntBASIC2.09□□□□□ -2.07
KRT9P35527 RNU6-1114P-201ENST00000516022 107 ntBASIC2.09□□□□□ -2.07
KRT9P35527 Y_RNA.668-201ENST00000516233 93 ntBASIC2.09□□□□□ -2.07
KRT9P35527 RNU6-911P-201ENST00000516523 104 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.09□□□□□ -2.07
KRT9P35527 MIR4648-201ENST00000580107 72 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AL390123.1-201ENST00000603216 237 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AC069114.2-201ENST00000604699 304 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AL353149.1-201ENST00000610667 244 ntBASIC2.09□□□□□ -2.07
KRT9P35527 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.09□□□□□ -2.07
KRT9P35527 AC006001.4-201ENST00000622243 395 ntBASIC2.09□□□□□ -2.07
KRT9P35527 snoZ196.1-201ENST00000625269 89 ntBASIC2.09□□□□□ -2.07
KRT9P35527 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.09□□□□□ -2.08
KRT9P35527 RNU6-770P-201ENST00000363929 105 ntBASIC2.08□□□□□ -2.08
KRT9P35527 RNU1-96P-201ENST00000364163 162 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.214-201ENST00000364201 112 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.307-201ENST00000365022 117 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.396-201ENST00000383949 103 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.415-201ENST00000384012 112 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.461-201ENST00000384263 103 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.592-201ENST00000410274 109 ntBASIC2.08□□□□□ -2.08
KRT9P35527 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 RNU2-20P-201ENST00000410425 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.08□□□□□ -2.08
KRT9P35527 Z98949.2-201ENST00000440996 144 ntBASIC2.08□□□□□ -2.08
KRT9P35527 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT9P35527 RNU6-408P-201ENST00000515910 100 ntBASIC2.08□□□□□ -2.08
KRT9P35527 AC005357.1-201ENST00000588399 301 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 AC010999.1-201ENST00000611856 324 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 AL442067.1-201ENST00000613261 223 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
KRT9P35527 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
KRT9P35527 Y_RNA.19-201ENST00000362462 99 ntBASIC2.07□□□□□ -2.08
KRT9P35527 RNU6-112P-201ENST00000363599 104 ntBASIC2.07□□□□□ -2.08
KRT9P35527 Y_RNA.222-201ENST00000364264 102 ntBASIC2.07□□□□□ -2.08
KRT9P35527 Y_RNA.471-201ENST00000384312 102 ntBASIC2.07□□□□□ -2.08
KRT9P35527 MIR548B-201ENST00000385247 97 ntBASIC2.07□□□□□ -2.08
KRT9P35527 ELOCP20-201ENST00000422460 345 ntBASIC2.07□□□□□ -2.08
KRT9P35527 RNU6-397P-201ENST00000516226 104 ntBASIC2.07□□□□□ -2.08
KRT9P35527 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
KRT9P35527 RNU6-388P-201ENST00000517012 105 ntBASIC2.07□□□□□ -2.08
KRT9P35527 RNU6-389P-201ENST00000517048 105 ntBASIC2.07□□□□□ -2.08
KRT9P35527 AK6P2-201ENST00000549020 471 ntBASIC2.07□□□□□ -2.08
KRT9P35527 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.07□□□□□ -2.08
KRT9P35527 MZT1P2-201ENST00000604387 248 ntBASIC2.07□□□□□ -2.08
KRT9P35527 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
KRT9P35527 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.07□□□□□ -2.08
KRT9P35527 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
KRT9P35527 MIR338-201ENST00000636369 67 ntBASIC2.07□□□□□ -2.08
KRT9P35527 AC010615.1-201ENST00000594254 1764 ntBASIC2.06□□□□□ -2.08
KRT9P35527 Y_RNA.64-201ENST00000362845 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms