Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORA20B-201ENST00000384220 132 ntBASIC0.34□□□□□ -2.36
RPA3P35244 MIR562-201ENST00000384894 95 ntBASIC0.34□□□□□ -2.36
RPA3P35244 RNU1-119P-201ENST00000391122 165 ntBASIC0.34□□□□□ -2.36
RPA3P35244 EIF4E2P1-201ENST00000393781 255 ntBASIC0.34□□□□□ -2.36
RPA3P35244 RNA5SP193-201ENST00000410353 107 ntBASIC0.34□□□□□ -2.36
RPA3P35244 RN7SKP142-201ENST00000411236 328 ntBASIC0.34□□□□□ -2.36
RPA3P35244 AC244098.3-201ENST00000424803 96 ntBASIC0.34□□□□□ -2.36
RPA3P35244 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.34□□□□□ -2.36
RPA3P35244 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.34□□□□□ -2.36
RPA3P35244 RPL30P10-201ENST00000488148 337 ntBASIC0.34□□□□□ -2.36
RPA3P35244 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.34□□□□□ -2.36
RPA3P35244 Y_RNA.673-201ENST00000516306 88 ntBASIC0.34□□□□□ -2.36
RPA3P35244 RNU6-107P-201ENST00000516643 102 ntBASIC0.34□□□□□ -2.36
RPA3P35244 MTND4LP26-201ENST00000518144 282 ntBASIC0.34□□□□□ -2.36
RPA3P35244 AP003716.2-201ENST00000528260 108 ntBASIC0.34□□□□□ -2.36
RPA3P35244 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.34□□□□□ -2.36
RPA3P35244 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.34□□□□□ -2.36
RPA3P35244 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.34□□□□□ -2.36
RPA3P35244 RNU6-94P-201ENST00000607728 107 ntBASIC0.34□□□□□ -2.36
RPA3P35244 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
RPA3P35244 Y_RNA.1-201ENST00000352915 104 ntBASIC0.33□□□□□ -2.36
RPA3P35244 RNU6-280P-201ENST00000364145 104 ntBASIC0.33□□□□□ -2.36
RPA3P35244 RNY1-201ENST00000364228 113 ntBASIC0.33□□□□□ -2.36
RPA3P35244 RNU4-41P-201ENST00000364426 143 ntBASIC0.33□□□□□ -2.36
RPA3P35244 SNORA72.3-201ENST00000365074 132 ntBASIC0.33□□□□□ -2.36
RPA3P35244 RNU6-1297P-201ENST00000384415 104 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MIR598-201ENST00000384868 97 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MIR891A-201ENST00000401237 79 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MIR1185-1-201ENST00000408598 86 ntBASIC0.33□□□□□ -2.36
RPA3P35244 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
RPA3P35244 ZNF885P-201ENST00000420174 1098 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MTCO1P20-201ENST00000425366 358 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
RPA3P35244 AC093019.1-201ENST00000443135 252 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MTCO1P19-201ENST00000443487 500 ntBASIC0.33□□□□□ -2.36
RPA3P35244 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.33□□□□□ -2.36
RPA3P35244 MTND3P7-201ENST00000474435 343 ntBASIC0.33□□□□□ -2.36
RPA3P35244 MTCO2P30-201ENST00000503662 364 ntBASIC0.33□□□□□ -2.36
RPA3P35244 AC018710.1-201ENST00000506509 158 ntBASIC0.33□□□□□ -2.36
RPA3P35244 AC091885.1-201ENST00000506658 268 ntBASIC0.33□□□□□ -2.36
RPA3P35244 RNU6-1110P-201ENST00000516462 101 ntBASIC0.33□□□□□ -2.36
RPA3P35244 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
RPA3P35244 AC068137.4-201ENST00000638485 296 ntBASIC0.33□□□□□ -2.36
RPA3P35244 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
RPA3P35244 RNU6-833P-201ENST00000363486 107 ntBASIC0.32□□□□□ -2.36
RPA3P35244 RNU6-407P-201ENST00000365280 104 ntBASIC0.32□□□□□ -2.36
RPA3P35244 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
RPA3P35244 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.32□□□□□ -2.36
RPA3P35244 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
RPA3P35244 SNORA36.2-201ENST00000384004 127 ntBASIC0.32□□□□□ -2.36
RPA3P35244 RNU6-376P-201ENST00000384731 106 ntBASIC0.32□□□□□ -2.36
RPA3P35244 MTCYBP10-201ENST00000424905 650 ntBASIC0.32□□□□□ -2.36
RPA3P35244 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.32□□□□□ -2.36
RPA3P35244 AC093303.1-201ENST00000514549 295 ntBASIC0.32□□□□□ -2.36
RPA3P35244 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.32□□□□□ -2.36
RPA3P35244 MTATP6P24-201ENST00000576835 677 ntBASIC0.32□□□□□ -2.36
RPA3P35244 AC024933.1-201ENST00000608472 348 ntBASIC0.32□□□□□ -2.36
RPA3P35244 MTND5P16-201ENST00000460269 1703 ntBASIC0.32□□□□□ -2.36
RPA3P35244 AL589743.1-201ENST00000551932 2712 ntBASIC0.31□□□□□ -2.36
RPA3P35244 RNU6-163P-201ENST00000384396 106 ntBASIC0.31□□□□□ -2.36
RPA3P35244 RNU6-1067P-201ENST00000384752 107 ntBASIC0.31□□□□□ -2.36
RPA3P35244 AC018865.2-201ENST00000423631 129 ntBASIC0.31□□□□□ -2.36
RPA3P35244 MTND3P16-201ENST00000452205 344 ntBASIC0.31□□□□□ -2.36
RPA3P35244 RNA5SP20-201ENST00000515976 84 ntBASIC0.31□□□□□ -2.36
RPA3P35244 MTND1P24-201ENST00000552175 861 ntBASIC0.31□□□□□ -2.36
RPA3P35244 PIGPP4-201ENST00000584447 307 ntBASIC0.31□□□□□ -2.36
RPA3P35244 AC100810.6-201ENST00000638068 285 ntBASIC0.31□□□□□ -2.36
RPA3P35244 Y_RNA.118-201ENST00000363300 101 ntBASIC0.3□□□□□ -2.36
RPA3P35244 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RPA3P35244 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.3□□□□□ -2.36
RPA3P35244 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.3□□□□□ -2.36
RPA3P35244 PIGPP3-201ENST00000425307 415 ntBASIC0.3□□□□□ -2.36
RPA3P35244 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.3□□□□□ -2.36
RPA3P35244 PCMTD1P1-201ENST00000455560 355 ntBASIC0.3□□□□□ -2.36
RPA3P35244 AC083904.1-201ENST00000487828 231 ntBASIC0.3□□□□□ -2.36
RPA3P35244 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
RPA3P35244 RNU7-41P-201ENST00000515917 61 ntBASIC0.3□□□□□ -2.36
RPA3P35244 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.3□□□□□ -2.36
RPA3P35244 AC023442.1-201ENST00000531247 422 ntBASIC0.3□□□□□ -2.36
RPA3P35244 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.3□□□□□ -2.36
RPA3P35244 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
RPA3P35244 AC073648.5-201ENST00000603502 305 ntBASIC0.3□□□□□ -2.36
RPA3P35244 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.3□□□□□ -2.36
RPA3P35244 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RPA3P35244 Y_RNA.296-201ENST00000364930 108 ntBASIC0.29□□□□□ -2.36
RPA3P35244 SNORA69-201ENST00000383895 132 ntBASIC0.29□□□□□ -2.36
RPA3P35244 CALM2P3-201ENST00000400429 449 ntBASIC0.29□□□□□ -2.36
RPA3P35244 RNU5A-5P-201ENST00000411054 116 ntBASIC0.29□□□□□ -2.36
RPA3P35244 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.29□□□□□ -2.36
RPA3P35244 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
RPA3P35244 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.29□□□□□ -2.36
RPA3P35244 RPS20P10-201ENST00000451209 253 ntBASIC0.29□□□□□ -2.36
RPA3P35244 AC067940.1-201ENST00000458411 300 ntBASIC0.29□□□□□ -2.36
RPA3P35244 RNU6-261P-201ENST00000459506 102 ntBASIC0.29□□□□□ -2.36
RPA3P35244 RPS3AP17-201ENST00000472594 777 ntBASIC0.29□□□□□ -2.36
RPA3P35244 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.29□□□□□ -2.36
RPA3P35244 AC036111.3-201ENST00000526389 112 ntBASIC0.29□□□□□ -2.36
RPA3P35244 MIR3908-201ENST00000579798 126 ntBASIC0.29□□□□□ -2.36
RPA3P35244 POLR3GP2-201ENST00000588366 668 ntBASIC0.29□□□□□ -2.36
RPA3P35244 AC120024.3-201ENST00000603167 156 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms