Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SNORD2.1-201ENST00000458762 69 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 RNU6-966P-201ENST00000516479 104 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 SCARNA24.2-201ENST00000516968 130 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXA11P31270 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 AL109918.3-201ENST00000603072 338 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 SNORD11B-201ENST00000607707 90 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 MIR7843-201ENST00000622274 79 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 AC068205.3-201ENST00000636385 468 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA11P31270 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA11P31270 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXA11P31270 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
HOXA11P31270 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HOXA11P31270 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.76-201ENST00000362931 109 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.101-201ENST00000363154 102 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.117-201ENST00000363294 101 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.200-201ENST00000364018 102 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.274-201ENST00000364714 101 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.331-201ENST00000365267 102 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 RNY4P28-201ENST00000365281 93 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.361-201ENST00000365515 120 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 Y_RNA.498-201ENST00000384460 102 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 MIR29B2-201ENST00000385055 81 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 MIR549A-201ENST00000385268 96 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA11P31270 MTCO1P5-201ENST00000433573 344 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA11P31270 AC004386.2-201ENST00000441858 148 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 SNORA27.4-201ENST00000516650 95 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 RNU2-12P-201ENST00000517216 168 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HOXA11P31270 AL162424.1-201ENST00000602325 221 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 AC037487.3-201ENST00000606668 112 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 FTX_2.1-201ENST00000618816 94 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 MIR3674-201ENST00000636576 68 ntBASIC2.29□□□□□ -2.04
HOXA11P31270 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.29□□□□□ -2.04
HOXA11P31270 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
HOXA11P31270 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA11P31270 Y_RNA.29-201ENST00000362570 113 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 Y_RNA.122-201ENST00000363331 96 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 Y_RNA.217-201ENST00000364214 105 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 Y_RNA.383-201ENST00000383855 97 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 MIR1298-201ENST00000408783 112 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 EDDM3CP-201ENST00000415977 425 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXA11P31270 Y_RNA.641-201ENST00000459414 105 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 RNU6-182P-201ENST00000516970 105 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 SNORA81.3-201ENST00000517283 198 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.28□□□□□ -2.04
HOXA11P31270 CBX3P4-201ENST00000538909 354 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 AC018630.3-201ENST00000542637 96 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 AC004467.1-201ENST00000615678 330 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 AC091932.3-201ENST00000624223 323 ntBASIC2.28□□□□□ -2.04
HOXA11P31270 AL596028.1-201ENST00000326971 197 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 Y_RNA.65-201ENST00000362846 100 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 RNU6-740P-201ENST00000364734 105 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 Y_RNA.415-201ENST00000384012 112 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 AC027124.2-201ENST00000428249 105 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 CR769767.1-201ENST00000436337 346 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 POLR2KP2-201ENST00000438155 177 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 AC091959.1-201ENST00000495857 238 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 RNU2-44P-201ENST00000516795 194 ntBASIC2.27□□□□□ -2.05
HOXA11P31270 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXA11P31270 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.27□□□□□ -2.05
HOXA11P31270 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.26□□□□□ -2.05
HOXA11P31270 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA11P31270 SNORA25.1-201ENST00000362326 128 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 Y_RNA.54-201ENST00000362766 105 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 U3.8-201ENST00000363675 217 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 Y_RNA.180-201ENST00000363867 113 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 RNU6-454P-201ENST00000364292 107 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 Y_RNA.297-201ENST00000364950 91 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 SNORA18.2-201ENST00000383865 132 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 RNU6-209P-201ENST00000384118 107 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 MIR17-201ENST00000385012 84 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 MIR586-201ENST00000385035 97 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 TOMM22P2-201ENST00000430735 237 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA11P31270 MRPS10P1-201ENST00000448483 130 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA11P31270 AL138752.1-201ENST00000452964 351 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA11P31270 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA11P31270 SNORA48.11-201ENST00000517015 89 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 SNORA31.25-201ENST00000517242 134 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 RPL30P11-203ENST00000598995 310 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AC005828.6-201ENST00000606610 232 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AC004792.1-201ENST00000614523 137 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AC006001.4-201ENST00000622243 395 ntBASIC2.26□□□□□ -2.05
HOXA11P31270 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA11P31270 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA11P31270 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
HOXA11P31270 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HOXA11P31270 MIR411-201ENST00000362239 96 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms