Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6-245P-201ENST00000384020 107 ntBASIC1.44□□□□□ -2.18
RPA1P27694 RNU6-950P-201ENST00000384651 107 ntBASIC1.44□□□□□ -2.18
RPA1P27694 RNU6-541P-201ENST00000384709 110 ntBASIC1.44□□□□□ -2.18
RPA1P27694 RNU6-308P-201ENST00000390957 107 ntBASIC1.44□□□□□ -2.18
RPA1P27694 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
RPA1P27694 RNU6-1156P-201ENST00000410365 100 ntBASIC1.44□□□□□ -2.18
RPA1P27694 ELOCP21-201ENST00000412558 336 ntBASIC1.44□□□□□ -2.18
RPA1P27694 COX6CP10-201ENST00000416832 224 ntBASIC1.44□□□□□ -2.18
RPA1P27694 RPL23AP50-201ENST00000434149 455 ntBASIC1.44□□□□□ -2.18
RPA1P27694 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.44□□□□□ -2.18
RPA1P27694 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
RPA1P27694 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.44□□□□□ -2.18
RPA1P27694 Y_RNA.653-201ENST00000459091 95 ntBASIC1.44□□□□□ -2.18
RPA1P27694 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.44□□□□□ -2.18
RPA1P27694 AC093023.1-201ENST00000547375 507 ntBASIC1.44□□□□□ -2.18
RPA1P27694 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.44□□□□□ -2.18
RPA1P27694 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.44□□□□□ -2.18
RPA1P27694 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.44□□□□□ -2.18
RPA1P27694 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
RPA1P27694 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPA1P27694 RNU6-1115P-201ENST00000362490 106 ntBASIC1.43□□□□□ -2.18
RPA1P27694 Y_RNA.813-201ENST00000364639 102 ntBASIC1.43□□□□□ -2.18
RPA1P27694 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
RPA1P27694 RNU1-139P-201ENST00000391307 165 ntBASIC1.43□□□□□ -2.18
RPA1P27694 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
RPA1P27694 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.43□□□□□ -2.18
RPA1P27694 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
RPA1P27694 AL050343.2-201ENST00000607338 280 ntBASIC1.43□□□□□ -2.18
RPA1P27694 AC100812.1-201ENST00000607622 580 ntBASIC1.43□□□□□ -2.18
RPA1P27694 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.43□□□□□ -2.18
RPA1P27694 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
RPA1P27694 MIR369-201ENST00000362155 70 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU1-62P-201ENST00000362599 164 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU6-1301P-201ENST00000362724 104 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU6-137P-201ENST00000363680 108 ntBASIC1.42□□□□□ -2.18
RPA1P27694 Y_RNA.287-201ENST00000364853 94 ntBASIC1.42□□□□□ -2.18
RPA1P27694 Y_RNA.364-201ENST00000365532 101 ntBASIC1.42□□□□□ -2.18
RPA1P27694 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU6-57P-201ENST00000411348 103 ntBASIC1.42□□□□□ -2.18
RPA1P27694 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.42□□□□□ -2.18
RPA1P27694 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.42□□□□□ -2.18
RPA1P27694 AC008134.1-201ENST00000420943 193 ntBASIC1.42□□□□□ -2.18
RPA1P27694 USP9YP16-201ENST00000430287 407 ntBASIC1.42□□□□□ -2.18
RPA1P27694 USP9YP23-201ENST00000455085 407 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU7-57P-201ENST00000459540 60 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU6-1114P-201ENST00000516022 107 ntBASIC1.42□□□□□ -2.18
RPA1P27694 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.42□□□□□ -2.18
RPA1P27694 Y_RNA.706-201ENST00000516933 99 ntBASIC1.42□□□□□ -2.18
RPA1P27694 AC022868.1-201ENST00000517767 391 ntBASIC1.42□□□□□ -2.18
RPA1P27694 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.42□□□□□ -2.18
RPA1P27694 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.42□□□□□ -2.18
RPA1P27694 AC015688.6-201ENST00000577737 104 ntBASIC1.42□□□□□ -2.18
RPA1P27694 MIR5690-201ENST00000583739 73 ntBASIC1.42□□□□□ -2.18
RPA1P27694 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
RPA1P27694 AC091925.1-201ENST00000623204 462 ntBASIC1.42□□□□□ -2.18
RPA1P27694 AC008873.1-201ENST00000625051 138 ntBASIC1.42□□□□□ -2.18
RPA1P27694 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPA1P27694 RNU6-961P-201ENST00000363893 105 ntBASIC1.41□□□□□ -2.18
RPA1P27694 RNU6-1040P-201ENST00000383974 107 ntBASIC1.41□□□□□ -2.18
RPA1P27694 RNU6-1145P-201ENST00000384246 107 ntBASIC1.41□□□□□ -2.18
RPA1P27694 MIR1253-201ENST00000408273 105 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AC004965.1-201ENST00000413033 213 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
RPA1P27694 MTCYBP10-201ENST00000424905 650 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.41□□□□□ -2.18
RPA1P27694 AC090617.3-201ENST00000573670 475 ntBASIC1.41□□□□□ -2.18
RPA1P27694 MIR4709-201ENST00000577272 72 ntBASIC1.41□□□□□ -2.18
RPA1P27694 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
RPA1P27694 SNORD58B-201ENST00000607313 66 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AC011476.5-201ENST00000615594 130 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AC007485.1-201ENST00000616755 206 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AC006001.4-201ENST00000622243 395 ntBASIC1.41□□□□□ -2.18
RPA1P27694 AL078596.1-201ENST00000624856 447 ntBASIC1.41□□□□□ -2.18
RPA1P27694 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
RPA1P27694 Y_RNA.138-201ENST00000363462 102 ntBASIC1.4□□□□□ -2.19
RPA1P27694 RNU5F-3P-201ENST00000363767 117 ntBASIC1.4□□□□□ -2.19
RPA1P27694 Y_RNA.187-201ENST00000363918 113 ntBASIC1.4□□□□□ -2.19
RPA1P27694 RNU6-454P-201ENST00000364292 107 ntBASIC1.4□□□□□ -2.19
RPA1P27694 Y_RNA.384-201ENST00000383909 102 ntBASIC1.4□□□□□ -2.19
RPA1P27694 MIR194-1-201ENST00000384892 85 ntBASIC1.4□□□□□ -2.19
RPA1P27694 RNU6-700P-201ENST00000391043 107 ntBASIC1.4□□□□□ -2.19
RPA1P27694 RNA5SP467-201ENST00000391274 118 ntBASIC1.4□□□□□ -2.19
RPA1P27694 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPA1P27694 Y_RNA.592-201ENST00000410274 109 ntBASIC1.4□□□□□ -2.19
RPA1P27694 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
RPA1P27694 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.19
RPA1P27694 RPL30P7-201ENST00000479312 323 ntBASIC1.4□□□□□ -2.19
RPA1P27694 AC010469.2-201ENST00000496412 480 ntBASIC1.4□□□□□ -2.19
RPA1P27694 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.4□□□□□ -2.19
RPA1P27694 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.4□□□□□ -2.19
RPA1P27694 AC010999.1-201ENST00000611856 324 ntBASIC1.4□□□□□ -2.19
RPA1P27694 AC095038.3-201ENST00000634439 195 ntBASIC1.4□□□□□ -2.19
RPA1P27694 U6.108-201ENST00000637764 58 ntBASIC1.4□□□□□ -2.19
RPA1P27694 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPA1P27694 Y_RNA.179-201ENST00000363844 90 ntBASIC1.39□□□□□ -2.19
RPA1P27694 Y_RNA.216-201ENST00000364205 93 ntBASIC1.39□□□□□ -2.19
RPA1P27694 RNU6-879P-201ENST00000364328 108 ntBASIC1.39□□□□□ -2.19
RPA1P27694 RNU6-926P-201ENST00000384075 107 ntBASIC1.39□□□□□ -2.19
RPA1P27694 RNU6-793P-201ENST00000384233 104 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms