Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RAB4AP20338 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 Y_RNA.106-201ENST00000363189 100 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 RNA5SP126-201ENST00000365092 109 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 SNORA17.3-201ENST00000391159 129 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 RNU6-373P-201ENST00000411247 98 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.6□□□□□ -2.31
RAB4AP20338 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 FABP5P4-201ENST00000437203 171 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 AL137792.2-201ENST00000443484 235 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 AC233266.1-201ENST00000454518 96 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.6□□□□□ -2.31
RAB4AP20338 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.6□□□□□ -2.31
RAB4AP20338 MIR4781-201ENST00000585250 76 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 MIR3942-201ENST00000585264 109 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 AC125232.2-201ENST00000592457 143 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 AC242852.1-201ENST00000612151 96 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 AC244015.1-201ENST00000622301 99 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 MTND5P16-201ENST00000460269 1703 ntBASIC0.6□□□□□ -2.31
RAB4AP20338 SNORD116-1-201ENST00000384335 95 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 MIR526A1-201ENST00000384897 85 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 AP1B1P2-201ENST00000416196 106 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 RNU6-1096P-201ENST00000517089 102 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 AC022868.1-201ENST00000517767 391 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 AL358944.1-201ENST00000528537 144 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.59□□□□□ -2.31
RAB4AP20338 FAM71BP1-201ENST00000604431 523 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 AC104465.1-201ENST00000611365 139 ntBASIC0.59□□□□□ -2.31
RAB4AP20338 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.59□□□□□ -2.32
RAB4AP20338 RNU6-833P-201ENST00000363486 107 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 Y_RNA.336-201ENST00000365307 109 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 MIR532-201ENST00000385025 91 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 RNA5SP213-201ENST00000391031 106 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 MIR873-201ENST00000401120 77 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 RNU5A-5P-201ENST00000411054 116 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 ELOCP21-201ENST00000412558 336 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.58□□□□□ -2.32
RAB4AP20338 AC098826.2-201ENST00000452011 651 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 PCNPP5-201ENST00000452246 481 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 snoU13.26-201ENST00000459452 105 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 CYCTP-201ENST00000504253 315 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 RNU6-864P-201ENST00000516256 108 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.58□□□□□ -2.32
RAB4AP20338 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.58□□□□□ -2.32
RAB4AP20338 AC120024.3-201ENST00000603167 156 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 AC022079.1-201ENST00000621546 602 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 AC090617.10-201ENST00000624308 134 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 AC127459.3-201ENST00000624328 466 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 AC024614.3-201ENST00000637860 256 ntBASIC0.58□□□□□ -2.32
RAB4AP20338 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RAB4AP20338 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.58□□□□□ -2.32
RAB4AP20338 RNU6-1059P-201ENST00000363752 98 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 RNU6-1090P-201ENST00000364065 94 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 RNU4-41P-201ENST00000364426 143 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 RNU4-12P-201ENST00000365233 139 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 MIR329-1-201ENST00000385028 80 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 AC009161.1-201ENST00000417306 376 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB4AP20338 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB4AP20338 EIF1P2-201ENST00000428233 350 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 USP9YP30-201ENST00000430729 455 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 SUMO1P2-201ENST00000452524 304 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 AC005840.1-201ENST00000498412 377 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 AC074133.1-201ENST00000515696 183 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 RNU6-314P-201ENST00000516574 104 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 RNU6-1116P-201ENST00000517269 99 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.57□□□□□ -2.32
RAB4AP20338 AC109635.3-201ENST00000529536 185 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 CBX3P8-201ENST00000532412 525 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB4AP20338 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB4AP20338 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB4AP20338 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 AL357075.2-201ENST00000614906 189 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 AC104260.1-201ENST00000616660 539 ntBASIC0.57□□□□□ -2.32
RAB4AP20338 Y_RNA.48-201ENST00000362710 103 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 Y_RNA.330-201ENST00000365230 109 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 RNU6-117P-201ENST00000365415 107 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 RNU6-1013P-201ENST00000384180 107 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 RNU6-163P-201ENST00000384396 106 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 MIR452-201ENST00000385020 85 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 MIR190B-201ENST00000401119 79 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 SNORA11.2-201ENST00000408318 127 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.56□□□□□ -2.32
RAB4AP20338 MTND4LP16-201ENST00000440828 295 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 Z98949.2-201ENST00000440996 144 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 MTND1P29-201ENST00000448112 647 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 snoU13.25-201ENST00000458945 104 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 AC018448.1-201ENST00000552843 316 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.56□□□□□ -2.32
RAB4AP20338 MIR3192-201ENST00000584920 77 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 AC027279.3-201ENST00000625055 122 ntBASIC0.56□□□□□ -2.32
RAB4AP20338 U6.115-201ENST00000636045 103 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms