Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TOP1P11387 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.35□□□□□ -2.19
TOP1P11387 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
TOP1P11387 RNU6-1115P-201ENST00000362490 106 ntBASIC1.35□□□□□ -2.19
TOP1P11387 RNY3P11-201ENST00000364153 102 ntBASIC1.35□□□□□ -2.19
TOP1P11387 RNU6-245P-201ENST00000384020 107 ntBASIC1.35□□□□□ -2.19
TOP1P11387 RNU6-418P-201ENST00000384035 107 ntBASIC1.35□□□□□ -2.19
TOP1P11387 RNU6-541P-201ENST00000384709 110 ntBASIC1.35□□□□□ -2.19
TOP1P11387 MIR329-1-201ENST00000385028 80 ntBASIC1.35□□□□□ -2.19
TOP1P11387 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
TOP1P11387 MIR1283-1-201ENST00000408494 87 ntBASIC1.35□□□□□ -2.19
TOP1P11387 MTCO2P27-201ENST00000420740 428 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AC092423.1-201ENST00000430165 186 ntBASIC1.35□□□□□ -2.19
TOP1P11387 MIR2053-201ENST00000459295 91 ntBASIC1.35□□□□□ -2.19
TOP1P11387 HMGN2P9-201ENST00000476875 229 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AC105758.1-201ENST00000506038 399 ntBASIC1.35□□□□□ -2.19
TOP1P11387 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.35□□□□□ -2.19
TOP1P11387 RNU6-1114P-201ENST00000516022 107 ntBASIC1.35□□□□□ -2.19
TOP1P11387 RNU6-307P-201ENST00000516743 106 ntBASIC1.35□□□□□ -2.19
TOP1P11387 RNA5SP481-201ENST00000516814 122 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
TOP1P11387 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.35□□□□□ -2.19
TOP1P11387 AC090617.3-201ENST00000573670 475 ntBASIC1.35□□□□□ -2.19
TOP1P11387 7SK.7-201ENST00000603504 247 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AC069114.2-201ENST00000604699 304 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AL078604.3-201ENST00000615580 211 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
TOP1P11387 AC100821.1-201ENST00000523153 2479 ntBASIC1.35□□□□□ -2.19
TOP1P11387 MTND4P29-201ENST00000503122 1372 ntBASIC1.34□□□□□ -2.19
TOP1P11387 AC010615.1-201ENST00000594254 1764 ntBASIC1.34□□□□□ -2.19
TOP1P11387 RNU6-490P-201ENST00000362985 107 ntBASIC1.34□□□□□ -2.19
TOP1P11387 Y_RNA.358-201ENST00000365491 99 ntBASIC1.34□□□□□ -2.19
TOP1P11387 Y_RNA.394-201ENST00000383942 103 ntBASIC1.34□□□□□ -2.19
TOP1P11387 RNU6-1145P-201ENST00000384246 107 ntBASIC1.34□□□□□ -2.19
TOP1P11387 RNU6-318P-201ENST00000384283 103 ntBASIC1.34□□□□□ -2.19
TOP1P11387 MIR586-201ENST00000385035 97 ntBASIC1.34□□□□□ -2.19
TOP1P11387 RNU2-7P-201ENST00000410794 178 ntBASIC1.34□□□□□ -2.19
TOP1P11387 USP9YP16-201ENST00000430287 407 ntBASIC1.34□□□□□ -2.19
TOP1P11387 AC016717.1-201ENST00000448918 286 ntBASIC1.34□□□□□ -2.19
TOP1P11387 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.34□□□□□ -2.19
TOP1P11387 USP9YP23-201ENST00000455085 407 ntBASIC1.34□□□□□ -2.19
TOP1P11387 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.34□□□□□ -2.19
TOP1P11387 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
TOP1P11387 MIR5695-201ENST00000579717 85 ntBASIC1.34□□□□□ -2.19
TOP1P11387 AC080078.3-201ENST00000605407 463 ntBASIC1.34□□□□□ -2.19
TOP1P11387 AL357075.2-201ENST00000614906 189 ntBASIC1.34□□□□□ -2.19
TOP1P11387 MIR8070-201ENST00000616510 88 ntBASIC1.34□□□□□ -2.19
TOP1P11387 AC008873.1-201ENST00000625051 138 ntBASIC1.34□□□□□ -2.19
TOP1P11387 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TOP1P11387 RNA5SP361-201ENST00000362686 118 ntBASIC1.33□□□□□ -2.2
TOP1P11387 RNU1-22P-201ENST00000363334 158 ntBASIC1.33□□□□□ -2.2
TOP1P11387 Y_RNA.146-201ENST00000363549 102 ntBASIC1.33□□□□□ -2.2
TOP1P11387 RNU6-727P-201ENST00000363592 107 ntBASIC1.33□□□□□ -2.2
TOP1P11387 SNORD87-201ENST00000364849 89 ntBASIC1.33□□□□□ -2.2
TOP1P11387 SNORD42.2-201ENST00000365570 69 ntBASIC1.33□□□□□ -2.2
TOP1P11387 Y_RNA.415-201ENST00000384012 112 ntBASIC1.33□□□□□ -2.2
TOP1P11387 RNU6-975P-201ENST00000384296 105 ntBASIC1.33□□□□□ -2.2
TOP1P11387 MIR548B-201ENST00000385247 97 ntBASIC1.33□□□□□ -2.2
TOP1P11387 MIR300-201ENST00000401138 83 ntBASIC1.33□□□□□ -2.2
TOP1P11387 Y_RNA.592-201ENST00000410274 109 ntBASIC1.33□□□□□ -2.2
TOP1P11387 RNU6-1001P-201ENST00000411265 100 ntBASIC1.33□□□□□ -2.2
TOP1P11387 AC022028.1-201ENST00000412054 408 ntBASIC1.33□□□□□ -2.2
TOP1P11387 AC018865.2-201ENST00000423631 129 ntBASIC1.33□□□□□ -2.2
TOP1P11387 AC236972.2-201ENST00000434979 310 ntBASIC1.33□□□□□ -2.2
TOP1P11387 RNU7-87P-201ENST00000459343 62 ntBASIC1.33□□□□□ -2.2
TOP1P11387 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.33□□□□□ -2.2
TOP1P11387 AC067942.3-201ENST00000512025 362 ntBASIC1.33□□□□□ -2.2
TOP1P11387 AC093023.1-201ENST00000547375 507 ntBASIC1.33□□□□□ -2.2
TOP1P11387 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOP1P11387 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOP1P11387 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOP1P11387 MTND5P35-201ENST00000557537 1720 ntBASIC1.32□□□□□ -2.2
TOP1P11387 Y_RNA.197-201ENST00000364004 102 ntBASIC1.32□□□□□ -2.2
TOP1P11387 RNU6-280P-201ENST00000364145 104 ntBASIC1.32□□□□□ -2.2
TOP1P11387 RNU6-1305P-201ENST00000364353 104 ntBASIC1.32□□□□□ -2.2
TOP1P11387 RNU6-1019P-201ENST00000364424 107 ntBASIC1.32□□□□□ -2.2
TOP1P11387 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
TOP1P11387 Y_RNA.395-201ENST00000383945 109 ntBASIC1.32□□□□□ -2.2
TOP1P11387 Y_RNA.535-201ENST00000384612 99 ntBASIC1.32□□□□□ -2.2
TOP1P11387 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
TOP1P11387 MIR1285-1-201ENST00000408593 84 ntBASIC1.32□□□□□ -2.2
TOP1P11387 ELOCP21-201ENST00000412558 336 ntBASIC1.32□□□□□ -2.2
TOP1P11387 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.32□□□□□ -2.2
TOP1P11387 AC060773.1-201ENST00000421698 310 ntBASIC1.32□□□□□ -2.2
TOP1P11387 AC096644.2-201ENST00000429278 159 ntBASIC1.32□□□□□ -2.2
TOP1P11387 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.32□□□□□ -2.2
TOP1P11387 AC007395.1-201ENST00000451333 677 ntBASIC1.32□□□□□ -2.2
TOP1P11387 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.32□□□□□ -2.2
TOP1P11387 RNU6-264P-201ENST00000517134 104 ntBASIC1.32□□□□□ -2.2
TOP1P11387 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
TOP1P11387 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.32□□□□□ -2.2
TOP1P11387 AL080274.1-201ENST00000605565 220 ntBASIC1.32□□□□□ -2.2
TOP1P11387 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.32□□□□□ -2.2
TOP1P11387 AC010999.1-201ENST00000611856 324 ntBASIC1.32□□□□□ -2.2
TOP1P11387 uc_338.22-201ENST00000622722 187 ntBASIC1.32□□□□□ -2.2
TOP1P11387 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.32□□□□□ -2.2
TOP1P11387 AC073544.1-201ENST00000600110 1595 ntBASIC1.31□□□□□ -2.2
TOP1P11387 RNU6-1301P-201ENST00000362724 104 ntBASIC1.31□□□□□ -2.2
TOP1P11387 RNU6-797P-201ENST00000363101 109 ntBASIC1.31□□□□□ -2.2
TOP1P11387 Y_RNA.179-201ENST00000363844 90 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms