Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC006566.1-201ENST00000608943 513 ntBASIC-0.1□□□□□ -2.43
FREM3P0C091 AC007684.1-201ENST00000609671 477 ntBASIC-0.1□□□□□ -2.43
FREM3P0C091 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.1□□□□□ -2.43
FREM3P0C091 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNU6-636P-201ENST00000384598 107 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 AL355143.1-201ENST00000407101 841 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 SNORA40.8-201ENST00000411034 126 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 Z98949.2-201ENST00000440996 144 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.11□□□□□ -2.43
FREM3P0C091 RPS29P8-201ENST00000445109 171 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 MTND4P33-201ENST00000556706 766 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 MIR371B-201ENST00000638082 66 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNU6-137P-201ENST00000363680 108 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNU6-660P-201ENST00000364566 109 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 MIR610-201ENST00000385139 96 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 MIR760-201ENST00000390220 80 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 AL663109.1-201ENST00000411498 844 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNU7-56P-201ENST00000458744 62 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RPS3AP17-201ENST00000472594 777 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNA5SP54-201ENST00000516951 92 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 RNU6-448P-201ENST00000517052 107 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 SNORA74.3-201ENST00000517108 154 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.11□□□□□ -2.43
FREM3P0C091 AC069113.3-201ENST00000521019 150 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 AC023442.1-201ENST00000531247 422 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 AC023157.2-201ENST00000540596 141 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.11□□□□□ -2.43
FREM3P0C091 U2.17-201ENST00000611454 95 ntBASIC-0.11□□□□□ -2.43
FREM3P0C091 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.11□□□□□ -2.43
FREM3P0C091 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.12□□□□□ -2.43
FREM3P0C091 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.12□□□□□ -2.43
FREM3P0C091 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.12□□□□□ -2.43
FREM3P0C091 RNU7-28P-201ENST00000516759 62 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 MTND1P5-201ENST00000517906 940 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 RNU6-323P-201ENST00000521915 107 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 AL157687.1-201ENST00000554853 619 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 MTCO3P23-201ENST00000561363 289 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 AC138869.1-201ENST00000568623 124 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 MIR4300-201ENST00000581016 96 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 MIR4264-201ENST00000583520 66 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 AC010608.3-201ENST00000625048 527 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 MIR6079-201ENST00000635807 62 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
FREM3P0C091 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
FREM3P0C091 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 RNU6-784P-201ENST00000384330 106 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 HSFY5P-201ENST00000453726 309 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 ELOCP24-201ENST00000456370 334 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 SNORD65B-201ENST00000459126 73 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.13□□□□□ -2.43
FREM3P0C091 RNU7-43P-201ENST00000516554 64 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 RNU7-172P-201ENST00000517125 64 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 UBL5P4-201ENST00000562584 236 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AC068790.2-201ENST00000602601 557 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AC138749.5-201ENST00000611461 208 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 HULC.1-201ENST00000612720 240 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.13□□□□□ -2.43
FREM3P0C091 AC006927.3-201ENST00000638789 384 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 SNORA72.1-201ENST00000363485 129 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 SNORD87-201ENST00000364849 89 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 MTCYBP4-201ENST00000401524 249 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 MIR1185-2-201ENST00000408687 86 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.13□□□□□ -2.43
FREM3P0C091 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.13□□□□□ -2.43
FREM3P0C091 AC084290.1-201ENST00000434995 374 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 SNORA19.2-201ENST00000516013 114 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 SNORA18.7-201ENST00000516910 131 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AC093027.1-201ENST00000546698 429 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 MIR3682-201ENST00000581338 84 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 RNU4-5P-201ENST00000607255 135 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 AC009161.2-201ENST00000624626 138 ntBASIC-0.13□□□□□ -2.43
FREM3P0C091 RNA5SP331-201ENST00000364986 107 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 RNU6-903P-201ENST00000391270 109 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 RNA5SP95-201ENST00000410319 137 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.14□□□□□ -2.43
FREM3P0C091 RNU2-56P-201ENST00000516826 190 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 RPL21P9-201ENST00000556149 474 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 MIR4509-3-201ENST00000578671 94 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 MIR4509-2-201ENST00000583920 94 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 AL157392.4-201ENST00000609756 345 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 MIR4509-1-201ENST00000618224 94 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 AC015726.2-201ENST00000620112 122 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 MIR377-201ENST00000362145 69 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 RNU6V-201ENST00000384105 107 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 RNU6-925P-201ENST00000384629 104 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 RNU2-29P-201ENST00000410423 189 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.14□□□□□ -2.43
FREM3P0C091 AL353997.1-201ENST00000432936 108 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.14□□□□□ -2.43
FREM3P0C091 AC018710.1-201ENST00000506509 158 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms