Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU6-606P-201ENST00000384721 111 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 RNU6-376P-201ENST00000384731 106 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.33□□□□□ -2.46
CXCL1P09341 snoU109.3-201ENST00000459477 145 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 RNA5SP268-201ENST00000516828 124 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 SNORA18.7-201ENST00000516910 131 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 MIR4762-201ENST00000585261 75 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.33□□□□□ -2.46
CXCL1P09341 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
CXCL1P09341 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
CXCL1P09341 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 RNU6-396P-201ENST00000365369 105 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 SNORA20B-201ENST00000384220 132 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 MIR516B2-201ENST00000385190 85 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 MT-TN-201ENST00000387400 73 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 SNORD123-201ENST00000459473 70 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 RPL23AP54-201ENST00000495129 419 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.34□□□□□ -2.46
CXCL1P09341 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 AL355375.2-201ENST00000574825 175 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 MIR8076-201ENST00000611401 83 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 MIR8087-201ENST00000612745 78 ntBASIC-0.34□□□□□ -2.46
CXCL1P09341 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.34□□□□□ -2.46
CXCL1P09341 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.35□□□□□ -2.46
CXCL1P09341 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 SNORD115-32-201ENST00000364079 82 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 RNU6-934P-201ENST00000365154 107 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 SSR1P2-201ENST00000415208 787 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AL358176.2-201ENST00000425769 204 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.35□□□□□ -2.47
CXCL1P09341 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.35□□□□□ -2.47
CXCL1P09341 RNU7-56P-201ENST00000458744 62 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AC091179.3-201ENST00000474761 144 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.35□□□□□ -2.47
CXCL1P09341 RNA5SP20-201ENST00000515976 84 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.35□□□□□ -2.47
CXCL1P09341 MIR4305-201ENST00000583252 102 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AC064836.2-201ENST00000609491 462 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AL157392.4-201ENST00000609756 345 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 AC104260.1-201ENST00000616660 539 ntBASIC-0.35□□□□□ -2.47
CXCL1P09341 RNU6-906P-201ENST00000384700 70 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 AC018865.2-201ENST00000423631 129 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.36□□□□□ -2.47
CXCL1P09341 AC009961.2-201ENST00000435771 251 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.36□□□□□ -2.47
CXCL1P09341 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.36□□□□□ -2.47
CXCL1P09341 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.36□□□□□ -2.47
CXCL1P09341 RPL23AP91-201ENST00000569211 455 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 MIR1273G-201ENST00000577677 100 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 CPDP1-201ENST00000579660 283 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.36□□□□□ -2.47
CXCL1P09341 AC011712.1-201ENST00000588959 234 ntBASIC-0.36□□□□□ -2.47
CXCL1P09341 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
CXCL1P09341 SNORA27.1-201ENST00000362604 124 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 RNU6-873P-201ENST00000363833 107 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.37□□□□□ -2.47
CXCL1P09341 MIR145-201ENST00000384967 88 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 AC098592.1-201ENST00000419352 333 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.37□□□□□ -2.47
CXCL1P09341 MTCO2P11-201ENST00000431069 680 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 MTND1P26-201ENST00000440488 538 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 AL137792.2-201ENST00000443484 235 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.37□□□□□ -2.47
CXCL1P09341 AC104692.1-201ENST00000472406 90 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 AC091885.1-201ENST00000506658 268 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.37□□□□□ -2.47
CXCL1P09341 SNORA14.1-201ENST00000516113 141 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.37□□□□□ -2.47
CXCL1P09341 AF250324.2-201ENST00000608299 610 ntBASIC-0.37□□□□□ -2.47
CXCL1P09341 SNORD113-6-201ENST00000363345 75 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-727P-201ENST00000363592 107 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-117P-201ENST00000365415 107 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-716P-201ENST00000365621 103 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 MIR1197-201ENST00000408818 88 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 AL606489.2-201ENST00000433886 234 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.38□□□□□ -2.47
CXCL1P09341 AC093303.1-201ENST00000514549 295 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-848P-201ENST00000515948 107 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-617P-201ENST00000516147 107 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-473P-201ENST00000516164 107 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 MTND1P8-201ENST00000571424 950 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 MIR4676-201ENST00000583078 72 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 Z84480.1-201ENST00000605131 311 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 AC022306.3-201ENST00000619930 550 ntBASIC-0.38□□□□□ -2.47
CXCL1P09341 SNORD68-201ENST00000363214 84 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 RNU6-280P-201ENST00000364145 104 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 RNY4P34-201ENST00000364779 95 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 RNU6-903P-201ENST00000391270 109 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 MTCYBP4-201ENST00000401524 249 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms