Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Y_RNA.240-201ENST00000364469 95 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 Y_RNA.243-201ENST00000364481 109 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 SNORD14D-201ENST00000384390 87 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 RNU6-1135P-201ENST00000411083 103 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 RPL23AP58-201ENST00000440453 469 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DOAP06340 ATP5EP1-201ENST00000510257 156 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DOAP06340 RNU6-965P-201ENST00000516721 96 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 MIR3910-1-201ENST00000580936 111 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DOAP06340 U6.106-201ENST00000636360 105 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.69□□□□□ -1.98
HLA-DOAP06340 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DOAP06340 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DOAP06340 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DOAP06340 Y_RNA.124-201ENST00000363339 93 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 Y_RNA.398-201ENST00000383952 99 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 MIR29B2-201ENST00000385055 81 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 MIR221-201ENST00000385135 110 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 RNU2-2P-201ENST00000410396 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOAP06340 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DOAP06340 snoU13.15-201ENST00000459407 104 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 AC091021.1-201ENST00000468051 388 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 UBL5P3-201ENST00000475112 231 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 HMGN2P9-201ENST00000476875 229 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 RNU5F-4P-201ENST00000516581 114 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 Y_RNA.703-201ENST00000516846 111 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 RNU2-4P-201ENST00000606190 192 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.15-201ENST00000611544 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.16-201ENST00000613119 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.12-201ENST00000613778 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.9-201ENST00000615427 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.11-201ENST00000616345 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.2-201ENST00000616535 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.3-201ENST00000617785 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.19-201ENST00000618602 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 RNU2-1-201ENST00000618664 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.6-201ENST00000619225 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.5-201ENST00000619465 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 U2.10-201ENST00000620268 191 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 AC008873.1-201ENST00000625051 138 ntBASIC2.68□□□□□ -1.98
HLA-DOAP06340 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DOAP06340 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HLA-DOAP06340 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DOAP06340 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOAP06340 Y_RNA.571-201ENST00000384753 98 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 MTCO2P33-201ENST00000402100 465 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 RNU6-394P-201ENST00000410735 107 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 AC018634.1-201ENST00000437554 401 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 AC016717.1-201ENST00000448918 286 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DOAP06340 AC023141.11-201ENST00000508864 202 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 RNU6-586P-201ENST00000517265 104 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DOAP06340 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DOAP06340 MIR3144-201ENST00000579460 79 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 AC105245.1-201ENST00000581934 244 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.67□□□□□ -1.98
HLA-DOAP06340 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DOAP06340 U3.8-201ENST00000363675 217 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 RNU6-818P-201ENST00000364837 108 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 RNU6-1130P-201ENST00000365434 107 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 U6atac.2-201ENST00000408644 118 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 TOMM22P2-201ENST00000430735 237 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 MICF-203ENST00000432679 129 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 AL392103.1-201ENST00000447000 198 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 RNU7-14P-201ENST00000459331 62 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 AC009127.3-201ENST00000570531 403 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 MIR5692C2-201ENST00000577959 77 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 AC069294.1-201ENST00000608397 350 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 MIR6132-201ENST00000622083 109 ntBASIC2.66□□□□□ -1.98
HLA-DOAP06340 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HLA-DOAP06340 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.65□□□□□ -1.98
HLA-DOAP06340 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.65□□□□□ -1.98
HLA-DOAP06340 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DOAP06340 U8.9-201ENST00000365667 134 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 AL355796.1-201ENST00000406706 323 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 MIR1294-201ENST00000408503 142 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 RNU6-855P-201ENST00000410395 104 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 RNU7-200P-201ENST00000516105 62 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 AC136628.3-201ENST00000521868 290 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 AP005660.1-201ENST00000522972 293 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 AC010329.5-201ENST00000623497 2174 ntBASIC2.65□□□□□ -1.99
HLA-DOAP06340 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DOAP06340 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HLA-DOAP06340 RNU6-743P-201ENST00000364151 106 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 snoU2_19.4-201ENST00000364329 80 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 Y_RNA.412-201ENST00000384001 104 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 Y_RNA.435-201ENST00000384095 112 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 MIR586-201ENST00000385035 97 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 MIR1185-2-201ENST00000408687 86 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DOAP06340 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 RPL39P40-201ENST00000445481 146 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 RNU6-789P-201ENST00000517105 102 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms