Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 Y_RNA.557-201ENST00000384680 107 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 RNU6-1050P-201ENST00000410388 107 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DPB1P04440 RNU7-87P-201ENST00000459343 62 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 RPL39P38-201ENST00000467018 153 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 RPL7P42-201ENST00000481005 679 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC105029.1-201ENST00000520250 669 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC090617.3-201ENST00000573670 475 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 MIR4778-201ENST00000577635 80 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC009229.3-201ENST00000608056 282 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC084782.3-201ENST00000612282 578 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 SNORD3E-202ENST00000627253 216 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 MIR6079-201ENST00000635807 62 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC068137.4-201ENST00000638485 296 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 AC073869.6-201ENST00000640656 341 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
HLA-DPB1P04440 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HLA-DPB1P04440 RNU6-392P-201ENST00000364926 101 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.339-201ENST00000365325 102 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.364-201ENST00000365532 101 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.404-201ENST00000383978 102 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 RNU6-1145P-201ENST00000384246 107 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AL034345.1-201ENST00000407768 123 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 UQCRBP2-201ENST00000447827 297 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DPB1P04440 HMGN1P7-201ENST00000491722 313 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.89□□□□□ -2.27
HLA-DPB1P04440 RNU6-922P-201ENST00000516753 99 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 RNU7-172P-201ENST00000517125 64 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AF235103.2-201ENST00000525753 346 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AL121579.1-201ENST00000555129 305 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AC073349.3-201ENST00000617616 186 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 MIR8065-201ENST00000620577 100 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AL513423.1-201ENST00000621695 132 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 AC006435.5-201ENST00000624486 112 ntBASIC0.89□□□□□ -2.27
HLA-DPB1P04440 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
HLA-DPB1P04440 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.6-201ENST00000362350 114 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 RNY1P16-201ENST00000363063 111 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 RNU6-1264P-201ENST00000383891 107 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 RNU6-939P-201ENST00000384634 107 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 MIR660-201ENST00000385235 97 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 MIR618-201ENST00000385287 98 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 MTND3P8-201ENST00000412909 339 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 AC074085.1-201ENST00000413598 418 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 CALM2P4-201ENST00000430810 426 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 MTND3P10-201ENST00000450967 341 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 AC091021.1-201ENST00000468051 388 ntBASIC0.88□□□□□ -2.27
HLA-DPB1P04440 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DPB1P04440 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.88□□□□□ -2.27
HLA-DPB1P04440 AC073544.1-201ENST00000600110 1595 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 SNORA27.1-201ENST00000362604 124 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.88-201ENST00000363029 99 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 SNORD114-27-201ENST00000363766 70 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNU6-879P-201ENST00000364328 108 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNU6-407P-201ENST00000365280 104 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNU6-318P-201ENST00000384283 103 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNU6-601P-201ENST00000384540 107 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNU6-510P-201ENST00000391239 108 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 MTCO3P19-201ENST00000415864 321 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 AC018865.2-201ENST00000423631 129 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNU7-94P-201ENST00000459576 63 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DPB1P04440 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DPB1P04440 RNA5SP168-201ENST00000516642 112 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 AC022868.1-201ENST00000517767 391 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 AC099654.5-201ENST00000636479 350 ntBASIC0.87□□□□□ -2.27
HLA-DPB1P04440 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNU6-454P-201ENST00000364292 107 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNU4-38P-201ENST00000364472 129 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNU4-76P-201ENST00000364509 141 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.358-201ENST00000365491 99 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.86□□□□□ -2.27
HLA-DPB1P04440 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNU6-700P-201ENST00000391043 107 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 U8.16-201ENST00000391279 133 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 MTND1P4-201ENST00000435196 415 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DPB1P04440 OR2A41P-201ENST00000473586 105 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 OR9P1P-201ENST00000496431 281 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNA5SP20-201ENST00000515976 84 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 Y_RNA.708-201ENST00000516950 96 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNU6-1213P-201ENST00000517075 94 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 RNA5SP404-201ENST00000517118 132 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC018448.1-201ENST00000552843 316 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC091178.2-201ENST00000584401 117 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC060780.3-201ENST00000589464 80 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
HLA-DPB1P04440 AL022345.2-201ENST00000606307 135 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms