Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR6738-201ENST00000619620 64 ntBASIC-0.67□□□□□ -2.52
TNFP01375 AL445523.1-201ENST00000451184 1362 ntBASIC-0.68□□□□□ -2.52
TNFP01375 MIR377-201ENST00000362145 69 ntBASIC-0.68□□□□□ -2.52
TNFP01375 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.68□□□□□ -2.52
TNFP01375 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.68□□□□□ -2.52
TNFP01375 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.68□□□□□ -2.52
TNFP01375 RNY3P5-201ENST00000384127 102 ntBASIC-0.68□□□□□ -2.52
TNFP01375 RNA5SP482-201ENST00000391269 118 ntBASIC-0.68□□□□□ -2.52
TNFP01375 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.68□□□□□ -2.52
TNFP01375 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.68□□□□□ -2.52
TNFP01375 RNU2-62P-201ENST00000410868 191 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AL117339.3-201ENST00000418733 162 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC098592.1-201ENST00000419352 333 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC243428.1-201ENST00000421099 264 ntBASIC-0.68□□□□□ -2.52
TNFP01375 MTATP6P23-201ENST00000440153 476 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.68□□□□□ -2.52
TNFP01375 RNU7-102P-201ENST00000458948 62 ntBASIC-0.68□□□□□ -2.52
TNFP01375 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.68□□□□□ -2.52
TNFP01375 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.68□□□□□ -2.52
TNFP01375 AC105417.1-201ENST00000514691 285 ntBASIC-0.68□□□□□ -2.52
TNFP01375 MIR2115-201ENST00000516657 100 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC026470.2-201ENST00000561492 181 ntBASIC-0.68□□□□□ -2.52
TNFP01375 MIR378F-201ENST00000578143 78 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC091178.2-201ENST00000584401 117 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC010525.2-201ENST00000590920 195 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AL596327.1-201ENST00000603629 213 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC018462.2-201ENST00000605375 395 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AL139022.2-201ENST00000606934 443 ntBASIC-0.68□□□□□ -2.52
TNFP01375 AC016911.1-201ENST00000613297 452 ntBASIC-0.68□□□□□ -2.52
TNFP01375 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.68□□□□□ -2.52
TNFP01375 SNORD38B-202ENST00000625943 69 ntBASIC-0.68□□□□□ -2.52
TNFP01375 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.68□□□□□ -2.52
TNFP01375 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.69□□□□□ -2.52
TNFP01375 MIR148A-201ENST00000362215 68 ntBASIC-0.69□□□□□ -2.52
TNFP01375 SNORD115-2-201ENST00000362842 82 ntBASIC-0.69□□□□□ -2.52
TNFP01375 SNORA72.1-201ENST00000363485 129 ntBASIC-0.69□□□□□ -2.52
TNFP01375 SNORD114-25-201ENST00000363742 72 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU6-621P-201ENST00000364752 109 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNY4P3-201ENST00000365254 95 ntBASIC-0.69□□□□□ -2.52
TNFP01375 SNORD14.1-201ENST00000365609 90 ntBASIC-0.69□□□□□ -2.52
TNFP01375 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.69□□□□□ -2.52
TNFP01375 SNORA26.5-201ENST00000391215 123 ntBASIC-0.69□□□□□ -2.52
TNFP01375 MIR876-201ENST00000401147 81 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU6-721P-201ENST00000410155 105 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU6-705P-201ENST00000410601 104 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNA5SP25-201ENST00000410815 110 ntBASIC-0.69□□□□□ -2.52
TNFP01375 SNRPGP10-201ENST00000432323 225 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AC091951.3-201ENST00000504093 246 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU2-10P-201ENST00000516375 211 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNA5SP461-201ENST00000516451 104 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU7-43P-201ENST00000516554 64 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU2-56P-201ENST00000516826 190 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU6-430P-201ENST00000517078 107 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNU6-58P-201ENST00000517143 103 ntBASIC-0.69□□□□□ -2.52
TNFP01375 RNA5SP47-201ENST00000517230 109 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AC105029.1-201ENST00000520250 669 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AC018448.1-201ENST00000552843 316 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AP001836.1-201ENST00000604675 523 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AC245008.1-201ENST00000608123 476 ntBASIC-0.69□□□□□ -2.52
TNFP01375 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AC138649.3-201ENST00000622154 254 ntBASIC-0.69□□□□□ -2.52
TNFP01375 AC097460.3-201ENST00000623099 442 ntBASIC-0.69□□□□□ -2.52
TNFP01375 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
TNFP01375 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.7□□□□□ -2.52
TNFP01375 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.7□□□□□ -2.52
TNFP01375 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.7□□□□□ -2.52
TNFP01375 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.7□□□□□ -2.52
TNFP01375 MIR452-201ENST00000385020 85 ntBASIC-0.7□□□□□ -2.52
TNFP01375 MIR516B2-201ENST00000385190 85 ntBASIC-0.7□□□□□ -2.52
TNFP01375 MIR873-201ENST00000401120 77 ntBASIC-0.7□□□□□ -2.52
TNFP01375 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.7□□□□□ -2.52
TNFP01375 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.7□□□□□ -2.52
TNFP01375 SNORA14.1-201ENST00000516113 141 ntBASIC-0.7□□□□□ -2.52
TNFP01375 RNU2-60P-201ENST00000517290 128 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AC090572.1-201ENST00000519251 160 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.7□□□□□ -2.52
TNFP01375 AC087683.1-201ENST00000591187 441 ntBASIC-0.7□□□□□ -2.52
TNFP01375 OR4H6P-202ENST00000603819 340 ntBASIC-0.7□□□□□ -2.52
TNFP01375 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AC012467.1-201ENST00000607740 256 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AC092574.1-201ENST00000609771 420 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AL078596.1-201ENST00000624856 447 ntBASIC-0.7□□□□□ -2.52
TNFP01375 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.7□□□□□ -2.52
TNFP01375 MIR4251-201ENST00000635819 61 ntBASIC-0.7□□□□□ -2.52
TNFP01375 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.71□□□□□ -2.52
TNFP01375 RNU6-10P-201ENST00000384036 107 ntBASIC-0.71□□□□□ -2.52
TNFP01375 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.71□□□□□ -2.52
TNFP01375 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.71□□□□□ -2.52
TNFP01375 PIGPP3-201ENST00000425307 415 ntBASIC-0.71□□□□□ -2.52
TNFP01375 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.71□□□□□ -2.52
TNFP01375 RPL23AP75-201ENST00000491601 451 ntBASIC-0.71□□□□□ -2.52
TNFP01375 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.71□□□□□ -2.52
TNFP01375 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.71□□□□□ -2.52
TNFP01375 AC117522.1-201ENST00000509821 380 ntBASIC-0.71□□□□□ -2.52
TNFP01375 RN7SKP19-201ENST00000516016 252 ntBASIC-0.71□□□□□ -2.52
TNFP01375 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.71□□□□□ -2.52
TNFP01375 AC107934.1-201ENST00000522215 217 ntBASIC-0.71□□□□□ -2.52
TNFP01375 RPL21P9-201ENST00000556149 474 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms