Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNORD114-27-201ENST00000363766 70 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 RNU6-245P-201ENST00000384020 107 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 SNORA67.2-201ENST00000384300 149 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 SNORD116-29-201ENST00000384516 83 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 RNU6-342P-201ENST00000384521 104 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 MIR586-201ENST00000385035 97 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 SNORA75.6-201ENST00000391318 127 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.55□□□□□ -2.16
PDGFBP01127 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.55□□□□□ -2.16
PDGFBP01127 AC099677.2-201ENST00000436385 175 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.55□□□□□ -2.16
PDGFBP01127 RNU6-344P-201ENST00000516635 111 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 AC091144.1-201ENST00000519573 138 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 AK6P2-201ENST00000549020 471 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 AC090617.3-201ENST00000573670 475 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 AP001094.1-201ENST00000579805 193 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 MIR4795-201ENST00000584182 89 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
PDGFBP01127 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
PDGFBP01127 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
PDGFBP01127 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PDGFBP01127 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PDGFBP01127 SNORA33-201ENST00000363664 130 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 RNU1-93P-201ENST00000364704 169 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 RNY4P36-201ENST00000391116 96 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 RNA5SP467-201ENST00000391274 118 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 MTATP6P23-201ENST00000440153 476 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 JTBP1-201ENST00000441314 247 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 UQCRBP2-201ENST00000447827 297 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 AC092991.1-201ENST00000477176 376 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 Y_RNA.683-201ENST00000516508 93 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 Y_RNA.718-201ENST00000517110 102 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
PDGFBP01127 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.54□□□□□ -2.16
PDGFBP01127 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 AC125232.2-201ENST00000592457 143 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 AC080078.3-201ENST00000605407 463 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 AL357075.2-201ENST00000614906 189 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 snoZ196.1-201ENST00000625269 89 ntBASIC1.54□□□□□ -2.16
PDGFBP01127 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 RNU4-73P-201ENST00000363164 141 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 SNORA72.2-201ENST00000365028 127 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 SNORA69.1-201ENST00000390904 137 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 EIF1P2-201ENST00000428233 350 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 AC005908.1-201ENST00000468701 347 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 RPL26P26-201ENST00000480251 434 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 RNU6-699P-201ENST00000517081 110 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 AC024614.2-201ENST00000577584 372 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 MIR6078-201ENST00000611069 100 ntBASIC1.53□□□□□ -2.16
PDGFBP01127 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
PDGFBP01127 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
PDGFBP01127 Y_RNA.263-201ENST00000364659 114 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 RNU6-1235P-201ENST00000384559 107 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MIR598-201ENST00000384868 97 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MIR515-2-201ENST00000384883 83 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MIR515-1-201ENST00000384884 83 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MIR329-1-201ENST00000385028 80 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MIR625-201ENST00000385047 85 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 RNA5SP323-201ENST00000391094 133 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 RNU6-1186P-201ENST00000410429 97 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MTCO2P27-201ENST00000420740 428 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 CST2P1-201ENST00000425770 87 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 RNU6-498P-201ENST00000459468 107 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.52□□□□□ -2.17
PDGFBP01127 AC133104.2-201ENST00000615272 193 ntBASIC1.52□□□□□ -2.17
PDGFBP01127 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PDGFBP01127 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PDGFBP01127 Y_RNA.498-201ENST00000384460 102 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 RNU1-139P-201ENST00000391307 165 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 AC016909.1-201ENST00000415916 166 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.51□□□□□ -2.17
PDGFBP01127 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
PDGFBP01127 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.51□□□□□ -2.17
PDGFBP01127 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 RNU6-1146P-201ENST00000516282 102 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 AC084364.2-201ENST00000546924 395 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.51□□□□□ -2.17
PDGFBP01127 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.51□□□□□ -2.17
PDGFBP01127 AC087588.2-201ENST00000617667 426 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 AC073544.1-201ENST00000600110 1595 ntBASIC1.51□□□□□ -2.17
PDGFBP01127 U3.8-201ENST00000363675 217 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 RNU6-137P-201ENST00000363680 108 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 SNORA63D-201ENST00000364359 132 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 Y_RNA.419-201ENST00000384041 102 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 RNU6-708P-201ENST00000384217 107 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PDGFBP01127 AC245047.4-201ENST00000433189 144 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 AC005002.2-201ENST00000438228 269 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 AC025647.1-201ENST00000517879 253 ntBASIC1.5□□□□□ -2.17
PDGFBP01127 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms